Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120279.Seq
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 160 2e-41
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 160 2e-41
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (388), Expect = 2e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
IRYFPTQALNFAFKDKYKQVFLGG+ +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 132 bits (319), Expect = 4e-33
Identities = 61/84 (72%), Positives = 67/84 (79%)
Frame = +1
Query: 511 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 690
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 691 IFKSDGLIGLYRGFGVSVQGIIIY 762
IFK+DG+ GLYRGFGVSVQGIIIY
Sbjct: 166 IFKADGITGLYRGFGVSVQGIIIY 189
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 198 MSNLADPVAFAKDFLAGGI 254
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 595 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 729
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 762 RASYFGFYD 788
RA+YFGFYD
Sbjct: 190 RAAYFGFYD 198
Score = 21.8 bits (44), Expect = 7.5
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 440 RYFPTQALNFAFKD 481
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (388), Expect = 2e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
IRYFPTQALNFAFKDKYKQVFLGG+ +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 132 bits (319), Expect = 4e-33
Identities = 61/84 (72%), Positives = 67/84 (79%)
Frame = +1
Query: 511 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 690
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 691 IFKSDGLIGLYRGFGVSVQGIIIY 762
IFK+DG+ GLYRGFGVSVQGIIIY
Sbjct: 166 IFKADGITGLYRGFGVSVQGIIIY 189
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 198 MSNLADPVAFAKDFLAGGI 254
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 595 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 729
YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 27.5 bits (58), Expect = 0.15
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 762 RASYFGFYD 788
RA+YFGFYD
Sbjct: 190 RAAYFGFYD 198
Score = 21.8 bits (44), Expect = 7.5
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 440 RYFPTQALNFAFKD 481
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,725
Number of Sequences: 438
Number of extensions: 4451
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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