Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120278.Seq
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    30   3.1  
X95246-1|CAA64535.1|  544|Drosophila melanogaster Rot57 protein ...    29   7.2  
AY051903-1|AAK93327.1|  493|Drosophila melanogaster LD39232p pro...    29   9.5  
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA...    29   9.5  
AE014134-3352|AAF53972.3|  493|Drosophila melanogaster CG9243-PA...    29   9.5  
AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB...    29   9.5  

>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 507 VPTQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAVANR 644
           + T +WR+    H++C  N CG   + NG  R   + PR  + + R
Sbjct: 740 ISTPLWRRDNTGHYLC--NACGLYMKMNGMNRPLIKQPRRLSASKR 783


>X95246-1|CAA64535.1|  544|Drosophila melanogaster Rot57 protein
           protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 621 AARVFAILPSRFSVASSHNHFVGKQNERSVASAKSAL 511
           AAR+  +LP   +VA+S  H+ G    R  A A + L
Sbjct: 285 AARILNVLPRALAVAASGAHYEGPSGHRFEAGAVAVL 321


>AY051903-1|AAK93327.1|  493|Drosophila melanogaster LD39232p
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 256 CGFGRHAQTSICTCRRRGHVLPVHNLHIL 170
           CG G   + +IC+C + G+++PV  L +L
Sbjct: 37  CGLGLQDERNICSC-KHGYIIPVLILFVL 64


>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
           protein.
          Length = 1860

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 307 GCKYSGSPCFATLSGAWCGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRC 155
           G  YS S C A ++    G   +A  S  T R R  +LP+ +L  +    C
Sbjct: 801 GKSYSSSECLADVTMPSYGGNSYASRSKSTSRSRKSMLPIRDLSEMRTDEC 851


>AE014134-3352|AAF53972.3|  493|Drosophila melanogaster CG9243-PA,
           isoform A protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 256 CGFGRHAQTSICTCRRRGHVLPVHNLHIL 170
           CG G   + +IC+C + G+++PV  L +L
Sbjct: 37  CGLGLQDERNICSC-KHGYIIPVLILFVL 64


>AE014134-3351|ABI31326.1|  574|Drosophila melanogaster CG9243-PB,
           isoform B protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 256 CGFGRHAQTSICTCRRRGHVLPVHNLHIL 170
           CG G   + +IC+C + G+++PV  L +L
Sbjct: 37  CGLGLQDERNICSC-KHGYIIPVLILFVL 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,020,142
Number of Sequences: 53049
Number of extensions: 873450
Number of successful extensions: 2244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)