Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120277.Seq
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   1.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.5  

>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +3

Query: 72  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 170
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +3

Query: 72  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 170
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +3

Query: 72  NNELQEIKSILVVMYESMEKHFSNVVDEIDSLK 170
           NN+    + + +V +++ E  F  ++ E+DS++
Sbjct: 44  NNQPVHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 286 NSTLIFFVEIGIFLPFFTTASHVRI---VLFCKLLNIINVSVLRESIS 152
           NST I FV     +PF++T   + +   ++   +L I+NV  +  +I+
Sbjct: 354 NSTNINFVSTFFKIPFYSTLRPINLLVQIILDVILLILNVHTILTTIT 401


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 48  YLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTF 182
           + +Y  H  +  ++I++ + +    +EK     V  I SL  DTF
Sbjct: 279 FAIYEMHWYDASKQIQNEVFIFMGQLEKPIVFYVANIFSLDLDTF 323


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 664 ICATFTVVADHDHARDHVLLTADLVRDLGP 753
           IC T  ++A+H   ++ +L   + V D  P
Sbjct: 307 ICYTLMLLANHREVQEEILKEMEAVLDEEP 336


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 664 ICATFTVVADHDHARDHVLLTADLVRDLGP 753
           IC T  ++A+H   ++ +L   + V D  P
Sbjct: 307 ICYTLMLLANHREVQEEILKEMEAVLDEEP 336


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 510 GGEQKLLKRLQRH 472
           GGE + L RL+RH
Sbjct: 226 GGESEALARLERH 238


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 343 LS*YTKNHI-VATIF*NMKPTNNVMFDDASVLWIDTDYIYQNLKMPLQAFQQLLFTTH 513
           +S YTK    +  I  ++  T  +MFD  +VL +     YQ+L   L+ F  +    H
Sbjct: 480 VSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVH 537


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,802
Number of Sequences: 336
Number of extensions: 4008
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)