Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120275.Seq
(836 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 104 2e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 103 7e-21
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 98 3e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 97 5e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 96 8e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 96 1e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 93 6e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 93 8e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 92 1e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 92 1e-17
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 92 2e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 89 1e-16
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 89 1e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 87 5e-16
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 87 7e-16
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 84 4e-15
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 83 6e-15
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 83 6e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 81 4e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 79 1e-13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 77 4e-13
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 77 4e-13
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 77 7e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 76 1e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 76 1e-12
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 75 2e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 75 3e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 3e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 74 5e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 73 9e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 73 1e-11
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 72 2e-11
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 5e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 68 3e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 68 3e-10
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 65 2e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 65 2e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 64 3e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 63 7e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 63 7e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 63 7e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 63 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 1e-08
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 62 1e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 62 2e-08
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 62 2e-08
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 62 2e-08
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 61 3e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 60 7e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 60 9e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 59 1e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 2e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 59 2e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 59 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 57 5e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 57 5e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 57 6e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 57 6e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 1e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 1e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 55 3e-06
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 54 4e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 54 4e-06
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 54 6e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 54 6e-06
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 54 6e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 53 8e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 53 1e-05
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 53 1e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 52 2e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 2e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 52 2e-05
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 51 3e-05
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 51 4e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 50 5e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 50 7e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 49 1e-04
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 49 2e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 49 2e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 2e-04
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 48 4e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 46 9e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 46 9e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 46 0.002
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 44 0.004
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 44 0.004
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 44 0.006
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 42 0.014
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 42 0.019
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.025
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 40 0.077
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.077
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 38 0.24
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.55
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 34 5.1
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 104 bits (250), Expect = 2e-21
Identities = 51/72 (70%), Positives = 55/72 (76%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFS 243
Query: 694 IYQDLV*FLILF 729
QDLV F +LF
Sbjct: 244 FSQDLVSFHMLF 255
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/94 (50%), Positives = 50/94 (53%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVPL+LGAPD+AFPR+NN F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/67 (65%), Positives = 45/67 (67%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 488 FDQLPLF 508
FDQ+PLF
Sbjct: 175 FDQMPLF 181
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 103 bits (246), Expect = 7e-21
Identities = 49/61 (80%), Positives = 50/61 (81%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYIL 219
Query: 694 I 696
I
Sbjct: 220 I 220
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/67 (65%), Positives = 45/67 (67%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 488 FDQLPLF 508
FDQ+PLF
Sbjct: 151 FDQMPLF 157
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/70 (58%), Positives = 45/70 (64%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 255 *DFDSYPPPL 284
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 97.9 bits (233), Expect = 3e-19
Identities = 54/93 (58%), Positives = 60/93 (64%)
Frame = -2
Query: 283 KGGG*ESKS*LFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 104
K GG LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 103 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 5
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/62 (59%), Positives = 44/62 (70%)
Frame = -3
Query: 426 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLNYL 247
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL L
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNL-ML 136
Query: 246 FV 241
F+
Sbjct: 137 FI 138
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -1
Query: 659 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPT 516
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNT 47
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 97.1 bits (231), Expect = 5e-19
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 249
Query: 694 I 696
I
Sbjct: 250 I 250
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS +
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 181 MHRLPLF 187
Score = 60.1 bits (139), Expect = 7e-08
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N VP+++GAPD+AFPR+NN F PP L
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 96.3 bits (229), Expect = 8e-19
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYIL
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 694 I 696
I
Sbjct: 231 I 231
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 255 *DF 263
F
Sbjct: 84 MSF 86
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Score = 41.9 bits (94), Expect = 0.019
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFG 761
LPGFGIISH+I E GKKETFG
Sbjct: 232 LPGFGIISHMIFNESGKKETFG 253
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 95.9 bits (228), Expect = 1e-18
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 694 I 696
I
Sbjct: 247 I 247
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 93.5 bits (222), Expect = 6e-18
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILI
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILI 255
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++G+PD+AFPR+NN F PP L
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 58.8 bits (136), Expect = 2e-07
Identities = 32/67 (47%), Positives = 38/67 (56%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 488 FDQLPLF 508
++PLF
Sbjct: 186 MYRIPLF 192
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 93.1 bits (221), Expect = 8e-18
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 694 I 696
I
Sbjct: 247 I 247
Score = 76.6 bits (180), Expect = 7e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 39.1 bits (87), Expect = 0.14
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFGIISH+++ GKKE FG+
Sbjct: 248 LPGFGIISHVVAYYAGKKEPFGY 270
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 694 I 696
I
Sbjct: 248 I 248
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/92 (45%), Positives = 48/92 (52%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
Score = 37.9 bits (84), Expect = 0.31
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFG+ISH+++ GKKE FG+
Sbjct: 249 LPGFGMISHVVTYYAGKKEPFGY 271
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 694 I 696
I
Sbjct: 247 I 247
Score = 76.2 bits (179), Expect = 1e-12
Identities = 41/94 (43%), Positives = 48/94 (51%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVPL++GAPD+AFPR+NN F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
Score = 38.3 bits (85), Expect = 0.24
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFG+ISHI++ GKKE FG+
Sbjct: 248 LPGFGMISHIVTYYSGKKEPFGY 270
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 694 I 696
I
Sbjct: 247 I 247
Score = 76.6 bits (180), Expect = 7e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 37.9 bits (84), Expect = 0.31
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFG+ISH+++ GKKE FG+
Sbjct: 248 LPGFGMISHVVTYYAGKKEPFGY 270
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 694 I 696
I
Sbjct: 353 I 353
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 42.7 bits (96), Expect = 0.011
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 72 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 245
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 246 INN*DFDSY 272
+NN + Y
Sbjct: 203 LNNLSYWMY 211
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 89.4 bits (212), Expect = 1e-16
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 694 I 696
I
Sbjct: 248 I 248
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 252 N 254
N
Sbjct: 100 N 100
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYIL
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYIL 250
Query: 694 I 696
I
Sbjct: 251 I 251
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 46.4 bits (105), Expect = 9e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 249 NN*DF 263
NN F
Sbjct: 102 NNFSF 106
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 86.6 bits (205), Expect = 7e-16
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYIL
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 694 I 696
I
Sbjct: 274 I 274
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 53.2 bits (122), Expect = 8e-06
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 75 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 252 N*DFDSYPPPLY 287
N + P L+
Sbjct: 126 NVSYWLLIPSLF 137
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 84.2 bits (199), Expect = 4e-15
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIM 289
Query: 694 I 696
I
Sbjct: 290 I 290
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +2
Query: 314 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 493
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 494 QLPLF 508
++PLF
Sbjct: 223 KMPLF 227
Score = 41.9 bits (94), Expect = 0.019
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 114 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DF 263
++N ++TAH N VP+++GAPD+AFPR+NN F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/61 (63%), Positives = 43/61 (70%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYIL
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYIL 247
Query: 694 I 696
I
Sbjct: 248 I 248
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/67 (53%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 488 FDQLPLF 508
++PLF
Sbjct: 179 MHKMPLF 185
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 249 NN*DF 263
N+ F
Sbjct: 99 NSIGF 103
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 83.4 bits (197), Expect = 6e-15
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYIL
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYIL 247
Query: 694 I 696
I
Sbjct: 248 I 248
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 249 NN 254
NN
Sbjct: 99 NN 100
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 675
AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 8e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +1
Query: 571 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILI 273
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 179
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 180 XXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL++G PD+AFPR+NN F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = +2
Query: 308 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLI 337
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 694 I 696
I
Sbjct: 265 I 265
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 84 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DF 263
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 264 DSYPPPLYY 290
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 694 I 696
I
Sbjct: 265 I 265
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 84 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DF 263
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 264 DSYPPPLYY 290
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 76.6 bits (180), Expect = 7e-13
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIIL 250
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 90 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DFDS 269
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 270 Y 272
Y
Sbjct: 108 Y 108
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
E G G G T+YP L H + D +F++HL GISS
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 76.2 bits (179), Expect = 1e-12
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 182
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 183 XXXXN*LVPLILGAPDIAFPRINN*DFDSYPP 278
N L+PL++GAPD+AFPR+NN F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 41.1 bits (92), Expect = 0.033
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 621
AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 255 *DFDSYPPPL 284
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 660
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 75.4 bits (177), Expect = 2e-12
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++I
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVII 257
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 249 N 251
N
Sbjct: 109 N 109
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILI 250
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 36.3 bits (80), Expect = 0.95
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 672
+V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 255 *DFDSYPPPLY 287
F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/67 (50%), Positives = 40/67 (59%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 488 FDQLPLF 508
++PLF
Sbjct: 179 MSRIPLF 185
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 255 *DFDSYPPPLYY 290
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 8.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 374 GRSVDLAIFSLHLAGISS 427
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 72.9 bits (171), Expect = 9e-12
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 660
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +3
Query: 72 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 252 N*DFDSYPP 278
N F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1
Query: 565 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILI 253
Score = 36.7 bits (81), Expect = 0.72
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 427
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.5 bits (73), Expect = 6.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 114 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
+YN I T H N +P++ G+P++A+PRIN+
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINS 104
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 70.5 bits (165), Expect = 5e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVI 231
Score = 36.7 bits (81), Expect = 0.72
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 320 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 68.1 bits (159), Expect = 3e-10
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 694 IYQDLV*FLILFHXXXXXXXXXVFRNN---LCYTSNWVIRIHCLSSSYIH 834
I L F I+ +F N L N +R+ L +SY+H
Sbjct: 253 I---LPGFGIISLLLSTYTTKEMFGNQTMILAMGFNSFVRLFGLGTSYVH 299
Score = 40.7 bits (91), Expect = 0.044
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE---V 684
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG +
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATII 247
Query: 685 YILIYQDL 708
+++Y D+
Sbjct: 248 MLMMYNDM 255
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 249 NN 254
NN
Sbjct: 99 NN 100
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +1
Query: 595 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILI 224
Score = 37.5 bits (83), Expect = 0.41
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFG+ISH+I+ GK+E FG+
Sbjct: 225 LPGFGMISHVIAHYSGKREPFGY 247
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG ++
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFGTTIGPLM 247
Query: 694 IY 699
+Y
Sbjct: 248 LY 249
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 249 NN*DF 263
NN F
Sbjct: 99 NNIGF 103
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 63.3 bits (147), Expect = 7e-09
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQV 203
Score = 41.1 bits (92), Expect = 0.033
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 87 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG +++ +
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG--QIWPI 262
Query: 694 IYQDLV*FLILFHXXXXXXXXXVFRNNLCYTSNW 795
I ++ +I+ + ++ N+ CY + +
Sbjct: 263 I---IIIIIIINYAICGKDFKKIYTNSPCYIAGY 293
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 84 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DF 263
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 264 DSYPPPLYY 290
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 63.3 bits (147), Expect = 7e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLV 301
Score = 33.5 bits (73), Expect = 6.7
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 255 *DFDSYPP 278
F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 62.9 bits (146), Expect = 1e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++I
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVII 257
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 326 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 427
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 488 FDQLPLF 508
++ +PLF
Sbjct: 184 YENVPLF 190
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 249 NN*DFDSYPPPL 284
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMI 258
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 255 *DFDSYPP 278
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYII 262
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLI 408
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 249 NN*DF 263
N+ F
Sbjct: 148 NSIGF 152
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 61.3 bits (142), Expect = 3e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 565 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLV 273
Score = 36.3 bits (80), Expect = 0.95
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLN 121
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILI
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILI 266
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 59.7 bits (138), Expect = 9e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIV 332
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 255 *DFDSYPP 278
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +1
Query: 580 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILI
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILI 265
Score = 34.7 bits (76), Expect = 2.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 176
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 177 XXXXXXN*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N VP+++G+PD+AFPR+NN F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILI 696
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILV 257
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L+
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLV 249
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 687
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 688 ILI 696
I+I
Sbjct: 283 IMI 285
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 117 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
Y I T H N L+PL++GA D+AFPR+N
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLN 130
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 57.2 bits (132), Expect = 5e-07
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 577 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILIYQDL 708
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL++ L
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPAL 259
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.8 bits (131), Expect = 6e-07
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 565 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMV 273
Score = 41.9 bits (94), Expect = 0.019
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
Score = 56.4 bits (130), Expect = 8e-07
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V IL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLIL 261
Query: 694 IYQDLV*FLIL 726
I+ +LIL
Sbjct: 262 IWLTSGIYLIL 272
Score = 46.4 bits (105), Expect = 9e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 84 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN*DF 263
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 264 DSYPPPLYY 290
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = +3
Query: 510 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 674
M C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 98 MICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 403
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 36.7 bits (81), Expect = 0.72
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 210 LILGAPDIAFPRINN*DFDSYPPPL 284
L+LGAPD+AFPR+NN F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 589 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+R + FFDP GGDP+L+QHLF FGHPEVYI+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYII 288
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 54.8 bits (126), Expect = 3e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +1
Query: 571 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILI
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILI 256
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A +L DRN T FFD A GG P+L+QHLF F HP VY+++
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVV 283
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +1
Query: 562 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYILI
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILI 245
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYII 272
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 53.6 bits (123), Expect = 6e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVI 246
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 75 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/49 (57%), Positives = 32/49 (65%), Gaps = 10/49 (20%)
Frame = +1
Query: 577 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYIL 693
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIV 286
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 53.2 bits (122), Expect = 8e-06
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 577 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYII 288
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILI
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILI 267
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +V L
Sbjct: 20 SISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFL 79
Query: 694 I----YQDL 708
I YQDL
Sbjct: 80 ILFWFYQDL 88
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +1
Query: 580 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+L DR L +DPA GG +L+QHLF FFGHPEVY+L
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVL 271
Score = 35.9 bits (79), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 72 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 52.0 bits (119), Expect = 2e-05
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVML 257
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYII 331
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
A +L DR FF A GDPIL+QHLF FFGHPEVYI+
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYII 268
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 50.8 bits (116), Expect = 4e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMV 266
Score = 41.1 bits (92), Expect = 0.033
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 75 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 254
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 255 *DFDSY 272
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +2
Query: 347 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 508
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLF 125
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.0 bits (114), Expect = 7e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 577 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+L +R + FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYII 262
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = +1
Query: 523 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 672
ITA A +L+ DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 673 HPEVYILI 696
HPEVYI++
Sbjct: 302 HPEVYIVL 309
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 594 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFN 695
K KYIIF S W F+STFILIFWT SLYFN
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFN 40
Score = 46.8 bits (106), Expect = 7e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 760 VFRNNLCYTSNWVIRIHCLSSSYIH 834
VF +NLCY SNW+I I+CLSSSYI+
Sbjct: 63 VFSDNLCYISNWIISIYCLSSSYIY 87
Score = 39.9 bits (89), Expect = 0.077
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2
Query: 698 TRIWYNFSYYFTRKRKKRNFW 760
T IWYNFSYYF K KK N W
Sbjct: 42 TSIWYNFSYYFPSKSKKGNLW 62
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 249 NN*DFDSYPPPL 284
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +1
Query: 577 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 693
+L +R FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYII 262
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF 660
A+ ITA A ++L DR + T FF P AGGG P+L+QHLF
Sbjct: 225 AMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLF 284
Query: 661 *FFGHPEVYILI 696
F+ HP VYI+I
Sbjct: 285 WFYSHPAVYIMI 296
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 111 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
+ Y +VT HA N L+PL++GA D+AFP +N
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLN 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 35.9 bits (79), Expect = 1.3
Identities = 25/69 (36%), Positives = 29/69 (42%)
Frame = +3
Query: 78 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN* 257
L G +IG QI VTA A L PL +GAP +A PR+ N
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 258 DFDSYPPPL 284
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 510 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 662
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILI 696
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI I
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAI 295
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 46.4 bits (105), Expect = 9e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 565 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILV 292
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 75 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 248
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 249 NN*DFDSYPPPL 284
NN F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILI
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILI 291
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVV 310
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFG 761
LPGFG+ISHIISQE GKKE FG
Sbjct: 161 LPGFGMISHIISQESGKKEAFG 182
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 568 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
A+ +L DR FF GG P+L+ +LF +GHPEVYI+I
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVI 287
Score = 35.5 bits (78), Expect = 1.7
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +3
Query: 72 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 252 N*DF 263
N F
Sbjct: 139 NLSF 142
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.3 bits (95), Expect = 0.014
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 598 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
L S F+P GG P+LYQ F F+ HP VY+++
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVML 265
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.9 bits (94), Expect = 0.019
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 625 GGGDPILYQHLF*FFGHPEVYILI 696
GGG P+L+QHLF F+ HP VYI++
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIML 299
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 111 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 251
+ Y + T HA N L+PL++GA D+AFP++N
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLN 136
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 41.5 bits (93), Expect = 0.025
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 580 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
+ DR L+T F+ GG +LY +L +GHPEVYILI
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILI 286
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 39.9 bits (89), Expect = 0.077
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 580 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
L DR L+ FF GG+ + + ++F FGHPEVYILI
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILI 311
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.9 bits (89), Expect = 0.077
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Frame = +1
Query: 514 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF 660
++ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLF 257
Query: 661 *FFGHPEVYILIYQDL 708
FFGHPEVYI+ + L
Sbjct: 258 WFFGHPEVYIVFFPAL 273
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 38.3 bits (85), Expect = 0.24
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 696 LPGFGIISHIISQERGKKETFGF 764
LPGFG+ISHI++ GKKE FG+
Sbjct: 13 LPGFGMISHIVAYYSGKKEPFGY 35
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +1
Query: 565 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 696
G +LL ++ S++ GG +++++LF +FGHPEVY+L+
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLL 276
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -1
Query: 647 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAHKI 504
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H++
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPHQL 621
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,234,988
Number of Sequences: 1657284
Number of extensions: 10618061
Number of successful extensions: 20779
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 19859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20725
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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