Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120274.Seq
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.19 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.4  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 418 AAGTKRKLDEYLDDSQSVVGQFNKNKLKPESRK 516
           A G  R LDEYLD     + + N  K+K  + K
Sbjct: 65  ADGNVRHLDEYLDVDAGTIAKLNALKVKNPNLK 97


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 20/78 (25%), Positives = 30/78 (38%)
 Frame = -3

Query: 385 KIPHYKQNWAMVLRNRQLKGFRIISRTNCFSEIISGLEQTFHYMLSSVNELTLAKKFEAA 206
           K PHY+ N   V         R+++R      + S  +     +  SV      + F+A 
Sbjct: 349 KKPHYELNMVEVRSPVTPADLRLLTRGRLVLTVSSVSKPEALRLSGSVVTKVTCELFQAT 408

Query: 205 AVSLSDTTVSAPSGVGLL 152
             S SDT     SG+  L
Sbjct: 409 LSSSSDTNRFGTSGLAWL 426


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 69  PTPSRASFDNGYSEFCDKQQPNDYL 143
           P P +   D    E CDK+ P  Y+
Sbjct: 102 PEPEKFDPDRFLPENCDKRHPYAYI 126


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 69  PTPSRASFDNGYSEFCDKQQPNDYLNYYNNP 161
           P P +   D    E C K+ P  YL +   P
Sbjct: 418 PDPEKFDPDRFLPENCQKRHPFAYLPFSAGP 448


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 216 LKLLQSRCQILPCRL 172
           LKL+Q++ +I  CRL
Sbjct: 248 LKLMQNKLEITACRL 262


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 69  PTPSRASFDNGYSEFCDKQQPNDYLNYYNNP 161
           P P +   D    E C K+ P  YL +   P
Sbjct: 418 PDPEKFDPDRFLPENCQKRHPFAYLPFSAGP 448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,638
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)