Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120272.Seq
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57317-1|AAC50890.2|  832|Homo sapiens p300/CBP-associated facto...    32   3.0  
BC070075-1|AAH70075.1|  832|Homo sapiens p300/CBP-associated fac...    32   3.0  
BC060823-1|AAH60823.1|  832|Homo sapiens p300/CBP-associated fac...    32   3.0  

>U57317-1|AAC50890.2|  832|Homo sapiens p300/CBP-associated factor
           protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = +1

Query: 139 FATSYRRKICVCEKIQFCFGAARAQ*YQI*N*II*SASLTCKNVRQIKQNRSSNIKTRIE 318
           +  +Y R +C C   QFC    R +  Q+    +  +  T    + ++Q R    K  +E
Sbjct: 278 YKENYTRWLCYCNVPQFCDSLPRYETTQVFGRTLLRSVFTVMRRQLLEQARQEKDKLPLE 337

Query: 319 KQLQFLTPLNKNFITYSVEDSISSN 393
           K+   LT   K F++   E+  S N
Sbjct: 338 KRTLILTHFPK-FLSMLEEEVYSQN 361


>BC070075-1|AAH70075.1|  832|Homo sapiens p300/CBP-associated factor
           protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = +1

Query: 139 FATSYRRKICVCEKIQFCFGAARAQ*YQI*N*II*SASLTCKNVRQIKQNRSSNIKTRIE 318
           +  +Y R +C C   QFC    R +  Q+    +  +  T    + ++Q R    K  +E
Sbjct: 278 YKENYTRWLCYCNVPQFCDSLPRYETTQVFGRTLLRSVFTVMRRQLLEQARQEKDKLPLE 337

Query: 319 KQLQFLTPLNKNFITYSVEDSISSN 393
           K+   LT   K F++   E+  S N
Sbjct: 338 KRTLILTHFPK-FLSMLEEEVYSQN 361


>BC060823-1|AAH60823.1|  832|Homo sapiens p300/CBP-associated factor
           protein.
          Length = 832

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = +1

Query: 139 FATSYRRKICVCEKIQFCFGAARAQ*YQI*N*II*SASLTCKNVRQIKQNRSSNIKTRIE 318
           +  +Y R +C C   QFC    R +  Q+    +  +  T    + ++Q R    K  +E
Sbjct: 278 YKENYTRWLCYCNVPQFCDSLPRYETTQVFGRTLLRSVFTVMRRQLLEQARQEKDKLPLE 337

Query: 319 KQLQFLTPLNKNFITYSVEDSISSN 393
           K+   LT   K F++   E+  S N
Sbjct: 338 KRTLILTHFPK-FLSMLEEEVYSQN 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,476,338
Number of Sequences: 237096
Number of extensions: 1987788
Number of successful extensions: 8314
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8312
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)