Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120268.Seq
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.3  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.9  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +1

Query: 112 LENYMENYMQYKIMSSIK*IRMKPNCLPSKFDCRADRKRKFTHSE 246
           ++ YM    Q   +     + M+P C+  +  C   RK K    E
Sbjct: 232 IDMYMRRKCQECRLKKCLSVGMRPECVVPEVQCAVKRKEKKAQKE 276


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 804 RHNIIFGSETFVCSNQAYYET*FLWKTNI 718
           +HN IFG  TF C+   +  +  L   NI
Sbjct: 19  QHNQIFGFVTFTCTRSNFRSSKLLILYNI 47



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 792  IFGSETFVCSNQAYY 748
            IFG  TF CSN+ ++
Sbjct: 1103 IFGLITFGCSNRCFF 1117


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 804 RHNIIFGSETFVCSNQAYYET*FLWKTNI 718
           +HN IFG  TF C+   +  +  L   NI
Sbjct: 37  QHNQIFGFVTFTCTRSNFRSSKLLILYNI 65


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  YIPNISKITF*YFFYRLCIE 83
           +IP  + +TF  F Y+ C+E
Sbjct: 160 WIPLCNSVTFSNFGYKQCVE 179


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  YIPNISKITF*YFFYRLCIE 83
           +IP  + +TF  F Y+ C+E
Sbjct: 393 WIPLCNSVTFSNFGYKQCVE 412


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  YIPNISKITF*YFFYRLCIE 83
           +IP  + +TF  F Y+ C+E
Sbjct: 393 WIPLCNSVTFSNFGYKQCVE 412


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 546 SSLSNLSSGTTVFFCWF 496
           S+ +N S   TVFFC F
Sbjct: 83  SASANASGVATVFFCLF 99


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = -1

Query: 317 LIFSCLFNFLDNSESLPFHKCGRGSL*VNFRFLSARQSNLDGKQFGFIRIHLMELIIL 144
           LIF    +FLDN +++ + K       V F  L+       GK F    + L+ LIIL
Sbjct: 225 LIFFATLDFLDNVDTIMYEKTN-----VTFVHLAVLNILRVGKNF----VCLLSLIIL 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,109
Number of Sequences: 336
Number of extensions: 3843
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)