Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120268.Seq
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570           30   2.6  
06_03_1510 + 30665857-30666038,30666137-30666236,30666358-306664...    29   6.0  

>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
          Length = 378

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -1

Query: 539 CQICPQEQQFFFAGSDCLLILASDILRGDVAIHTCLAFV 423
           C IC +   +FF   D  L+  S     DVA+HT  AFV
Sbjct: 107 CDICQESHAYFFCLEDRALLCRS----CDVAVHTANAFV 141


>06_03_1510 +
           30665857-30666038,30666137-30666236,30666358-30666438,
           30666514-30666618,30666722-30666916,30667440-30667501,
           30667870-30667885,30668007-30668068,30668933-30668951
          Length = 273

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 446 IHTCLAFVFLCWSYLDSFVITTPIFKWLDILTTRWQRYNN 327
           +H CLAF+F   ++L +F   + +     IL +RW R+++
Sbjct: 12  LHCCLAFLFKFLAFLQAFAAVSALLYAAWIL-SRWARHHH 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,056,331
Number of Sequences: 37544
Number of extensions: 347913
Number of successful extensions: 751
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)