Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120267.Seq
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 40 0.003
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 37 0.015
SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_14389| Best HMM Match : PHD (HMM E-Value=0.0005) 35 0.078
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 34 0.10
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_20465| Best HMM Match : Somatostatin (HMM E-Value=9.3) 30 1.7
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 30 2.2
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_17346| Best HMM Match : PHD (HMM E-Value=2.1e-09) 29 2.9
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 28 6.7
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 28 8.9
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 28 8.9
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 28 8.9
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPPKKS-NCTDGNVRSVIKHPTPNRSVRKERSS 585
MA CD C R++HL CL PPL + P+ S C R K+ TP R K++ S
Sbjct: 1206 MAKCDNCPRNFHLKCLEPPLVKMPRVSWTCPKCKKRRA-KNSTPRRKREKKKHS 1258
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CD C R YH++CL PP+ +PP+
Sbjct: 338 CDDCDRGYHMYCLNPPMDKPPE 359
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Frame = +1
Query: 412 SERPLMAACDTCRRHYHLHCLRPPLTRPPKKS----NCT----DGNVRSVIKHPTPNRSV 567
SE + CD C YH+HC PPL R P+ + CT D + ++ +K T ++
Sbjct: 1734 SEGGELLCCDICPLAYHVHCAYPPLRRVPRGNWACQVCTGADEDRSSKARVKKSTIKEAL 1793
Query: 568 RKERSSSFPNTVQ*RRSHHRRPAESRHAXXXXXXXXXXXXTDRKSTRKA 714
+K + P + + +P + R+ TRKA
Sbjct: 1794 KKAKGKQKPGSA----TKKTKPKQDSSKKKRKRSPSPATSASREGTRKA 1838
Score = 35.1 bits (77), Expect = 0.059
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPPK 501
M CD C R +H++CL+PP+ P+
Sbjct: 1639 MLLCDACDRGHHMYCLKPPIKHIPE 1663
>SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 36.3 bits (80), Expect = 0.025
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CD C R YH+ CL P LT+ PK
Sbjct: 122 CDNCDRGYHMSCLDPKLTKAPK 143
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPP 498
CDTC YHL CL PPLT P
Sbjct: 199 CDTCTLVYHLSCLDPPLTTIP 219
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 409 RSERPLMAACDTCRRHYHLHCLRPPLTRPP 498
RS+ L+ CD C YHL CLRP L R P
Sbjct: 907 RSDETLLL-CDECNMGYHLFCLRPSLDRIP 935
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPPKK----SNCTDGNVRSVIKHPTP 555
+ CD C R YH C PPL P+ S C + ++ +K P P
Sbjct: 999 LICCDGCPRVYHRECHHPPLRYVPRGSWVCSGCKNPKKKNTLKLPVP 1045
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPP 498
+ CD C +H+ C+ PPLT PP
Sbjct: 208 LVQCDFCPLGFHMDCINPPLTTPP 231
>SB_14389| Best HMM Match : PHD (HMM E-Value=0.0005)
Length = 82
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPP 498
+ CD C +H+ C+ PPLT PP
Sbjct: 8 LVQCDFCPLGFHMDCINPPLTTPP 31
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTR-PPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFP 594
+ CD C YHL CL PP+ R P + C + I+HP R+ ++ P
Sbjct: 461 LLCCDKCPMAYHLKCLIPPMMRVPTGEWKCPRCQIE--IQHPEMFRAFSRKNDMDEP 515
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTR-PPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFP 594
+ CD C YHL CL PP+ R P + C + I+HP R+ ++ P
Sbjct: 23 LLCCDKCPMAYHLKCLIPPMMRVPTGEWKCPRCQIE--IQHPEMFRAFSRKNDMDEP 77
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 412 SERPLMAACDTCRRHYHLHCLRPPLTRPP 498
S+ + CD+C YH +CL PPL + P
Sbjct: 810 SDEARLLLCDSCDISYHTYCLDPPLEKVP 838
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPP 498
+ C+ C YHL CL+PPL + P
Sbjct: 279 LLCCEICPGVYHLQCLKPPLEQVP 302
>SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CD C YH CLRPPL P+
Sbjct: 233 CDKCDAAYHTACLRPPLLTIPQ 254
>SB_20465| Best HMM Match : Somatostatin (HMM E-Value=9.3)
Length = 263
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = -1
Query: 693 VCGIVPRTWTAETRSVPGLCGSAMMAPSLLYRIRERR--GPFFSNTPVRS--RMFYHTPN 526
+C +P+ W + R PGL G + A LL ER G F + RM + P
Sbjct: 75 LCNAIPKVWKDKLRDNPGLIGQSKPAARLLRLGNERYEIGKFMAKQVYNHIVRMKFKPPT 134
Query: 525 IAIRTVALLGRASE 484
+ + +G + E
Sbjct: 135 AQLNILQRIGGSPE 148
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPKKSNCT 516
CD C+R YH+ CL P P+ S T
Sbjct: 219 CDKCQRGYHVDCLGPSYPVVPEGSEDT 245
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 409 RSERPLMAACDTCRRHYHLHCLRPPLTRPP 498
R +R L+ CD C + YH+ CL PL P
Sbjct: 161 REDRLLL--CDDCDKGYHMECLTSPLEFVP 188
>SB_17346| Best HMM Match : PHD (HMM E-Value=2.1e-09)
Length = 238
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPPKKSNC 513
M C+ C R YH C+R P T K+ C
Sbjct: 188 MVQCEACGRWYHCACVRVPPTAVHKEWLC 216
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 525 CSECDKTSDSEPEC*KRKVLVV 590
C +CD+ S++E +C KRK +V
Sbjct: 862 CGKCDRKSNNEKQCDKRKHFIV 883
>SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 401 HTAHAPHNDAEQHKKKHNHLYLTT*YYASPETVWGEN 291
H HN ++K + H Y+T + + VW EN
Sbjct: 550 HNKRMEHNRRREYKHRETHTYMTDCFQGTIVHVWTEN 586
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRP 480
CD C+R YH+ CL P
Sbjct: 878 CDKCQRGYHVDCLGP 892
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 424 LMAACDTCRRHYHLHCLRPPL 486
L CD C YH+ CLR P+
Sbjct: 798 LAICCDGCDTWYHIKCLRMPM 818
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 421 PLMAACDTCRRHYHLHCLRPPLTRPPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFPNT 600
P +A +T + HC P+ PP S ++ S KH P++ V+ +S+ NT
Sbjct: 107 PTLARTNTAHISPYKHCPHQPVQTPPTSSRANTAHI-SQCKH-CPHQPVQTLPTSARTNT 164
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -3
Query: 640 TLRVGDDGSVFTVP---YSGTTRTFLF*HSGS 554
T VGD+GS + + YSGTT L HSGS
Sbjct: 531 TFSVGDEGSKYLLTVGGYSGTTGDSLTSHSGS 562
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 440 SHAAIRGRSLRPPHTAHAPHNDAEQHKKKHNHL 342
SH+ ++ H H+D+ HKK H H+
Sbjct: 547 SHSEVKEEDQHIILKVHLTHSDSSAHKKHHTHI 579
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,811
Number of Sequences: 59808
Number of extensions: 350543
Number of successful extensions: 1078
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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