Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120267.Seq
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 36 0.039
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 36 0.039
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 34 0.12
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 33 0.16
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 33 0.16
AC024750-4|AAF60438.2| 339|Caenorhabditis elegans Seven tm rece... 31 0.84
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 31 1.1
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 30 1.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z79759-7|CAE18047.1| 239|Caenorhabditis elegans Hypothetical pr... 29 4.5
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.5
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 29 4.5
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 29 4.5
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 412 SERPLMAACDTCRRHYHLHCLRPPLTRPPKKSN 510
+E+ CD C + YH+ CL PPLTR PK++N
Sbjct: 536 TEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNN 568
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 513 YGWQCSECDKTSDSEPE 563
+GW C EC+++SDSE E
Sbjct: 569 FGWICHECNESSDSEQE 585
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC YH +C+ PPLT P+
Sbjct: 343 CDTCPSSYHAYCIDPPLTEIPE 364
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC R YH+ C+ + +PP+
Sbjct: 280 CDTCTRAYHVACIDENMEQPPE 301
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC YH +C+ PPLT P+
Sbjct: 343 CDTCPSSYHAYCIDPPLTEIPE 364
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC R YH+ C+ + +PP+
Sbjct: 280 CDTCTRAYHVACIDENMEQPPE 301
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC YH +C+ PPLT P+
Sbjct: 343 CDTCPSSYHAYCIDPPLTEIPE 364
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC R YH+ C+ + +PP+
Sbjct: 280 CDTCTRAYHVACIDENMEQPPE 301
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPP 498
CD C R YHL+CL P L + P
Sbjct: 329 CDDCDRGYHLYCLTPALEKAP 349
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPKK 504
CD+C +H +C+ PPLT PK+
Sbjct: 332 CDSCVCSFHAYCIDPPLTEVPKE 354
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC R YH C+ + PP+
Sbjct: 271 CDTCPRAYHTVCIDENMEEPPE 292
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPKK 504
CD+C +H +C+ PPLT PK+
Sbjct: 332 CDSCVCSFHAYCIDPPLTEVPKE 354
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CDTC R YH C+ + PP+
Sbjct: 271 CDTCPRAYHTVCIDENMEEPPE 292
>AC024750-4|AAF60438.2| 339|Caenorhabditis elegans Seven tm
receptor protein 173 protein.
Length = 339
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 557 FGVGCFITLRTLPSVQLLFLGGR 489
FG+GC++TL T+P + +L G +
Sbjct: 205 FGLGCYLTLLTIPFISILVAGAK 227
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 436 CDTCRRHYHLHCL 474
CDTC R YH HC+
Sbjct: 2123 CDTCTREYHYHCI 2135
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 436 CDTCRRHYHLHCL 474
CDTC R YH HC+
Sbjct: 2123 CDTCTREYHYHCI 2135
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 427 MAACDTCRRHYHLHCLRPPLTRPPK 501
M CD C H+ C RP +T+ P+
Sbjct: 1100 MLVCDGCESGCHMECFRPRMTKVPE 1124
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CD C YH++C++P L + P+
Sbjct: 581 CDECDVSYHIYCMKPLLDKIPQ 602
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 436 CDTCRRHYHLHCLRPPLTRPPK 501
CD C YH++C++P L + P+
Sbjct: 581 CDECDVSYHIYCMKPLLDKIPQ 602
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 415 ERPLMAACDTCRRHYHLHCLRPPLTRPPKKSNCTDGNVRSVIKHPT 552
++ ++A C HY+LH + PPL PP + D N+ VI + T
Sbjct: 297 QKDVIALC-ALATHYNLHSVVPPL--PPMQLLENDQNILEVIDNQT 339
>Z79759-7|CAE18047.1| 239|Caenorhabditis elegans Hypothetical
protein ZK858.8 protein.
Length = 239
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -2
Query: 419 RSLRPP--HTAHAPHNDAEQHKKKHNHL 342
R+++PP H A AP+ + H+++HN++
Sbjct: 43 RNIQPPRRHNAPAPNQNRRNHQQRHNNM 70
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 463 LHCLRPPLTRPPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFPNTVQ 606
L + P R PKK TDGN + + T RKE+ P Q
Sbjct: 17 LEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQ 64
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 463 LHCLRPPLTRPPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFPNTVQ 606
L + P R PKK TDGN + + T RKE+ P Q
Sbjct: 17 LEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQ 64
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 463 LHCLRPPLTRPPKKSNCTDGNVRSVIKHPTPNRSVRKERSSSFPNTVQ 606
L + P R PKK TDGN + + T RKE+ P Q
Sbjct: 17 LEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPKQKQ 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,132,899
Number of Sequences: 27780
Number of extensions: 268350
Number of successful extensions: 892
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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