SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120265.Seq
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    72   2e-14
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    61   5e-11
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    61   5e-11
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    60   1e-10
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    58   3e-10
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    57   8e-10
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    57   8e-10
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    56   1e-09
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    53   1e-08
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    53   1e-08
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           53   1e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    51   4e-08
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    50   7e-08
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    50   1e-07
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    48   5e-07
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    47   8e-07
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    36   0.002
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.2  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   2.2  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   2.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.9  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   6.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.0  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.0  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 72.1 bits (169), Expect = 2e-14
 Identities = 32/68 (47%), Positives = 47/68 (69%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNIIPHVQ 322
           P++WK Q ++ L K  KPP +P+SYRPI L S +GK+ E +I+ RL +++E    +   Q
Sbjct: 466 PDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQ 525

Query: 321 YGFRRGRS 298
           YGFR+GRS
Sbjct: 526 YGFRKGRS 533



 Score = 34.7 bits (76), Expect = 0.004
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -3

Query: 171  WYNKLKMASRDFITIISRLRFGHSTVPAHLARLGIVESS-YCTFCNDSVGDIEHFIF 4
            W ++ K    DF   +++L  GH  + ++    GI+E S  C  C D+V D+EH +F
Sbjct: 900  WVSR-KHGEVDFF--LTQLLTGHGFLRSYFVEKGILEGSPNCPECGDAVEDVEHVLF 953


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 60.9 bits (141), Expect = 5e-11
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVE--VNNIIPH 328
           PE WK Q ++ L K  KPP DP+S+RPI L +  GK  E ++  RL  ++E   N  +  
Sbjct: 470 PEQWKKQRLVLLPKPGKPPGDPSSFRPICLLNNAGKTFERLLLDRLNEHLEDSDNPQLSE 529

Query: 327 VQYGFRRGRS 298
            QYGFR GRS
Sbjct: 530 YQYGFRLGRS 539


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 60.9 bits (141), Expect = 5e-11
 Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNI--IPH 328
           P  WK Q ++ L K  KPP + +SYRP+S+   +GK+ E +I  RL  ++E  +   +  
Sbjct: 480 PSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSD 539

Query: 327 VQYGFRRGRS 298
            QYGFRRGRS
Sbjct: 540 AQYGFRRGRS 549



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -3

Query: 126  ISRLRFGHSTVPAHLARLGIVESSYCTFCNDSVGDIEHFIFK 1
            +S++  GH  +  +L ++    S  C  C   V  +EH +F+
Sbjct: 931  LSQVLSGHGFLREYLNKMRFTSSPACPRCPGVVEGVEHVMFE 972


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 59.7 bits (138), Expect = 1e-10
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNI--IPH 328
           P  WK Q ++ L K  KPP + +SYRP+ +   +GK+ E +I  RL  ++E  +   +  
Sbjct: 541 PPQWKRQRLVLLPKPGKPPGESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSD 600

Query: 327 VQYGFRRGRS 298
            QYGFRRGRS
Sbjct: 601 AQYGFRRGRS 610



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 126  ISRLRFGHSTVPAHLARLGIVESSYCTFCNDSVGDIEHFIFK 1
            +S++  GH     HL  + +  S  CT C       EH +F+
Sbjct: 991  LSQVLSGHGFFREHLCGMQLTSSPDCTRCPGVAESAEHAMFE 1032


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 58.4 bits (135), Expect = 3e-10
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = -3

Query: 507 KIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNIIPH 328
           K P+ WK Q ++ + K +KPP +P S RPI L    GK  E +I  RL +++E  N +  
Sbjct: 448 KFPDEWKRQRLVLIPKPNKPPGEPGSVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSD 507

Query: 327 VQYGFRRGRS 298
            Q+GFR  RS
Sbjct: 508 DQFGFRSRRS 517


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 56.8 bits (131), Expect = 8e-10
 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -3

Query: 507 KIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYV---EVNNI 337
           + P  WK Q ++ L K  KPP + +S+RP+ + + +GK+ E +I  RL  ++   E +++
Sbjct: 484 EFPAHWKIQRLVLLQKPGKPPGESSSFRPLGMLNGLGKVLERLILNRLNEFLENGETSHL 543

Query: 336 IPHVQYGFRRGRS 298
            P+ QYGFRRG+S
Sbjct: 544 SPN-QYGFRRGKS 555



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 126  ISRLRFGHSTVPAHLARLGIVESSYCTFCNDSVGDIEHFIFK 1
            +S++  GH      L R+G   S  C  C       EH +F+
Sbjct: 940  LSQVLSGHGFFRDDLCRMGFTPSPDCIRCTGVPETAEHAMFE 981


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 56.8 bits (131), Expect = 8e-10
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = -3

Query: 519 LALKKIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVE--V 346
           L +   P+ WK Q ++ L K  K P +P+S+RPI L    GK  E ++  RL  Y+E   
Sbjct: 469 LDMSCFPQPWKKQRLVLLPKPGKSPGEPSSFRPICLLDNTGKALERLLLNRLNEYIEDPE 528

Query: 345 NNIIPHVQYGFRRGRS 298
           +  +   Q+GFRRGRS
Sbjct: 529 SPQLSEQQFGFRRGRS 544


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 56.4 bits (130), Expect = 1e-09
 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNI--IPH 328
           P  WK Q ++ L K  KPP + +SYRP+ +   +GK+ E +I  RL  ++E  +   +  
Sbjct: 526 PAQWKRQRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSD 585

Query: 327 VQYGFRRGRS 298
            Q+GFRRGRS
Sbjct: 586 RQFGFRRGRS 595


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 53.2 bits (122), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNIIPHVQ 322
           P  WK Q ++ L K  KPP+D ++ RP++L     K+ E +I  RL  Y E  + +   Q
Sbjct: 446 PIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQ 505

Query: 321 YGFRRGRS 298
           +GFR+GRS
Sbjct: 506 FGFRKGRS 513


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 53.2 bits (122), Expect = 1e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = -3

Query: 522 SLALKKIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVN 343
           +L   + P  WK Q ++ + K  KPP  P+++RP+ L   + K+ E +I  RL  Y E  
Sbjct: 500 TLTTGQFPSMWKIQKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTEGP 559

Query: 342 NIIPHVQYGFRRGRS 298
           + +   Q+GFR+ RS
Sbjct: 560 HGLSDRQFGFRKKRS 574



 Score = 28.3 bits (60), Expect = 0.31
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = -3

Query: 180  VAPWYNKLKMASRDFITIISRLRFGHSTVPAHLARLGIVESSYCTFCNDSVGDIEHFIF 4
            V  W ++ K    D+   ++++  GH    ++L R     SS C  C D    ++H +F
Sbjct: 931  VGAWLDR-KHGDVDYF--VTQVLSGHGCFRSYLHRFNRASSSRCPACKDEDETVDHVMF 986


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNII--PH 328
           P  WK Q ++ L K  KPP    SYRP+ +   +GK+ E +I  RL +++E    +    
Sbjct: 533 PAPWKRQRLVLLPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSD 592

Query: 327 VQYGFRRGRS 298
            Q+GFRRGRS
Sbjct: 593 RQHGFRRGRS 602


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 51.2 bits (117), Expect = 4e-08
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
 Frame = -3

Query: 510 KKIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVE--VNNI 337
           ++ P+ WK Q +  + K  KPP   +S+RPI L +  GK+ E ++  R+   +E   +  
Sbjct: 469 ERFPDEWKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYERLLLSRINDVIEDPESPR 528

Query: 336 IPHVQYGFRRGRS 298
           +   QYGFRRGRS
Sbjct: 529 LAENQYGFRRGRS 541


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 50.4 bits (115), Expect = 7e-08
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = -3

Query: 432 SYRPISLSSCVGKLNENMIKMRLESYVEVNNIIPHVQYGFR 310
           SYRPISL SC+GK+ E +++ R+  +   NNIIP  Q+GFR
Sbjct: 1   SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFR 41


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMR-LESYVEVNNIIPHV 325
           P+ WK Q ++ L K  K P + +SYRP+ +   +GK+ E +I  R LE     +  +   
Sbjct: 488 PQQWKRQRLVLLPKPGKAPGESSSYRPLCMLDALGKVLERLILNRHLED--PDSPQLSDA 545

Query: 324 QYGFRRGRS 298
           QYGFRRGRS
Sbjct: 546 QYGFRRGRS 554


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 47.6 bits (108), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = -3

Query: 501 PESWKTQ-CVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNIIPHV 325
           P++WK Q  V+ + K  K P +  S RPI L   V K  E +I  RL +++E    +   
Sbjct: 454 PDNWKKQRLVLSIPKPGKRPGESGSSRPICLIDGVAKGLERVILHRLNNHIERVQGLSEN 513

Query: 324 QYGFRRGRS 298
           QYGFR+GR+
Sbjct: 514 QYGFRKGRA 522



 Score = 33.9 bits (74), Expect = 0.006
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 126  ISRLRFGHSTVPAHLARLGIVESSYCTFCNDSVGDIEHFIF 4
            +S+   GH    +HL R+G V S  C  C D     EH IF
Sbjct: 894  MSQFLSGHGFFRSHLHRMGYVPSPVCPACGDENQTAEHTIF 934


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 46.8 bits (106), Expect = 8e-07
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVE--VNNIIPH 328
           P +WK Q ++ + K  KP     SYRP+ +   +GK+ E +I  RL  ++E   +  +  
Sbjct: 466 PAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSD 525

Query: 327 VQYGFRRGRS 298
            QYGFRRG S
Sbjct: 526 RQYGFRRGCS 535


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 18/68 (26%), Positives = 39/68 (57%)
 Frame = -3

Query: 510 KKIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRLESYVEVNNIIP 331
           +K+P+ + T  V   L  D+  ++P  YRP++  S + K+  ++I  +++ + + NN++ 
Sbjct: 508 RKLPK-FITGGVTYFLPKDQNTKNPAKYRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMT 566

Query: 330 HVQYGFRR 307
             Q G R+
Sbjct: 567 EEQTGRRK 574


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 501 PESWKTQCVIPLLKHDKPPEDPNSYRPISL 412
           P  W  QC +P+     P  + + Y  I+L
Sbjct: 279 PTDWHVQCNVPICAEKWPSPEQDDYYTIAL 308


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 210 FFPNSASHCTVAPWYNKLKMASRDF 136
           FFP++A++    PW N    A+ DF
Sbjct: 338 FFPDAATNPGGKPWKNNSPQAATDF 362


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 210 FFPNSASHCTVAPWYNKLKMASRDF 136
           FFP++A++    PW N    A+ DF
Sbjct: 338 FFPDAATNPGGKPWKNNSPQAATDF 362


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -3

Query: 522 SLALKKIPESWKTQCVIPLLKHDKPPEDPNSYRPISLSSCVGKLNENMIKMRL 364
           SLA    P++W+   ++P+ K      D  +YR I+    + K+ E +I   L
Sbjct: 587 SLANGYFPKAWRKSWMVPIYKKG-DRTDAINYRGITSLCAIAKVFELVIYKNL 638


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 332 HMFNMASGEGEVVLTASSLSCQIFSCQCSAQQTSGGELLRG 210
           H     SG G  +L   +L+ Q+  C+C  +    GE+ RG
Sbjct: 129 HSVTSGSGSGLPLLIQRTLAKQVSLCECIGRGRY-GEVWRG 168


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 214 EVLSQFCLSLYCSTMV*QTENGQSGLYYDYKQTAFWSLDRPSPPSS 77
           EV+S    +LY    + +   G++ L Y   Q    S+D P  P +
Sbjct: 124 EVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASMDAPPQPEA 169


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 171 WYNKLKMASRDFITIISRLRFGHSTVPA 88
           + +++   +R+F+TI++ LR     VPA
Sbjct: 170 YVDQVDAVAREFMTIVAELRDAKCEVPA 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,895
Number of Sequences: 2352
Number of extensions: 18860
Number of successful extensions: 65
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -