Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120264X.Seq
         (533 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95191-1|CAA64490.1|  290|Homo sapiens delta-sarcoglycan protein.      30   4.5  
BX537948-1|CAD97916.1|  289|Homo sapiens hypothetical protein pr...    30   4.5  
BC020740-1|AAH20740.1|  290|Homo sapiens sarcoglycan, delta (35k...    30   4.5  
AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608 pr...    29   7.8  

>X95191-1|CAA64490.1|  290|Homo sapiens delta-sarcoglycan protein.
          Length = 290

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 161 FEAVVCENGGLFVLTGGAAVTCHI 232
           FE  VC NG LF+   GA  TC I
Sbjct: 261 FEICVCANGRLFLSQAGAGSTCQI 284


>BX537948-1|CAD97916.1|  289|Homo sapiens hypothetical protein
           protein.
          Length = 289

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 161 FEAVVCENGGLFVLTGGAAVTCHI 232
           FE  VC NG LF+   GA  TC I
Sbjct: 260 FEICVCANGRLFLSQAGAGSTCQI 283


>BC020740-1|AAH20740.1|  290|Homo sapiens sarcoglycan, delta (35kDa
           dystrophin-associated glycoprotein) protein.
          Length = 290

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 161 FEAVVCENGGLFVLTGGAAVTCHI 232
           FE  VC NG LF+   GA  TC I
Sbjct: 261 FEICVCANGRLFLSQAGAGSTCQI 284


>AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608
           protein.
          Length = 2623

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 274 DYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQ-NGAY 432
           D  G    +M  +  T +  C+  +Y + D+LT +I +  PLV  + YQ NG +
Sbjct: 531 DKSGKLELQMADSFDTGVYHCISSNYDDADILTYRITVVEPLV--EAYQENGIH 582


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,001,898
Number of Sequences: 237096
Number of extensions: 1197371
Number of successful extensions: 2452
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2452
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)