Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120264X.Seq
(533 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 25 0.37
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 24 0.85
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 24 0.85
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 22 3.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 3.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 4.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 4.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 4.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 6.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.9
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 7.9
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 25.4 bits (53), Expect = 0.37
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 272 KSMHFNRFCSRRRR 231
K HFNR+ +RRRR
Sbjct: 25 KEFHFNRYLTRRRR 38
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 24.2 bits (50), Expect = 0.85
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 272 KSMHFNRFCSRRRR 231
K H+NR+ +RRRR
Sbjct: 25 KEFHYNRYLTRRRR 38
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 24.2 bits (50), Expect = 0.85
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 272 KSMHFNRFCSRRRR 231
K H+NR+ +RRRR
Sbjct: 287 KEFHYNRYLTRRRR 300
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 22.2 bits (45), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 272 KSMHFNRFCSRRRR 231
K H+N + +RRRR
Sbjct: 25 KEFHYNHYLTRRRR 38
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.2 bits (45), Expect = 3.4
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = +1
Query: 355 ELDVLTRQIYMSNPLVMLKCYQNGAYRLNGQIDLHLNRHIKCIKTQYNDEFVWLD 519
+L+ LT + N V+L N + + +N +Y D ++W+D
Sbjct: 99 DLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVD 153
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 155 DCFEAVVCENGGLFVLTGGAAV 220
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 155 DCFEAVVCENGGLFVLTGGAAV 220
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 155 DCFEAVVCENGGLFVLTGGAAV 220
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 6.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 224 CHIXXXXXXXXXNA*ILIITAFAQKKCFATC 316
C I NA +L ITAF ++ A C
Sbjct: 127 CIIQSFAAETSANATVLTITAFTVERYIAIC 157
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 123 LWLKQSWHLSKIVSKP 170
LW++QSW+ K+ +P
Sbjct: 79 LWVEQSWYDYKLRWEP 94
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 123 LWLKQSWHLSKIVSKP 170
LW++QSW+ K+ +P
Sbjct: 79 LWVEQSWYDYKLRWEP 94
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 501 IVVLCFYAFYMAV*VQIDL 445
I++L + FY+ V ++IDL
Sbjct: 116 IIILAWALFYLLVSLRIDL 134
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 501 IVVLCFYAFYMAV*VQIDL 445
I++L + FY+ V ++IDL
Sbjct: 169 IIILAWALFYLLVSLRIDL 187
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/28 (21%), Positives = 19/28 (67%)
Frame = +3
Query: 81 ILRQRILKIACAIKLWLKQSWHLSKIVS 164
+ +++ + + AIK W+++ H+ ++V+
Sbjct: 91 LTKKQEMLVRSAIKYWVERHKHIVRLVT 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,151
Number of Sequences: 438
Number of extensions: 2174
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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