Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120263.Seq
(661 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 166 4e-40
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 153 3e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 147 2e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 133 3e-30
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 5e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 129 5e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 1e-21
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 97 4e-19
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 94 3e-18
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 82 1e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 74 4e-12
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 73 5e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 5e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 72 1e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 2e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 71 3e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 68 2e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 68 2e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 67 3e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 67 3e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 66 5e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 7e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 66 7e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 1e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 65 2e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 1e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 62 2e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 60 4e-08
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 59 1e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 1e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 58 2e-07
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 57 3e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 56 1e-06
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 56 1e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 7e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 51 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 3e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 9e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 9e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 8e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.006
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.008
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.023
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.023
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 41 0.030
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 38 0.21
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.28
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.28
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.37
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 37 0.49
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.49
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.49
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.86
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.86
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 36 1.1
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.1
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.0
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.6
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 34 2.6
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 3.5
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 6.1
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.1
UniRef50_P41846 Cluster: WBSCR14 protein homolog; n=2; Caenorhab... 33 6.1
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 33 8.0
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 8.0
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 8.0
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 166 bits (404), Expect = 4e-40
Identities = 80/88 (90%), Positives = 83/88 (94%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGS-HT 518
RGAIILAKLS++PVRRGYWGNKIG HT
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
KPHTVPCKVTG+CGSV VRLIPAPRGTGIVSA
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSA 207
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
K + KEW+PVTKLGRLV++ I LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 607 VPKKLLQMAGVQDCYTS 657
VPKKLL MAG+ DCYTS
Sbjct: 209 VPKKLLMMAGIDDCYTS 225
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 153 bits (372), Expect = 3e-36
Identities = 75/88 (85%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGS-HT 518
RGAIILAKLS++PV RGYWGNKIG HT
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAP 580
KPHTVPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 166 VPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
+PVTKLG L+ + I LE IYLFSLPIK+S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 147 bits (356), Expect = 2e-34
Identities = 64/91 (70%), Positives = 82/91 (90%), Gaps = 1/91 (1%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ ++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVA
Sbjct: 63 KEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVA 121
Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
TAIRGAII+ KLS++P+RRGYWG +G HT
Sbjct: 122 TAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2
Query: 512 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFR 628
PHTVP KV+GKCGSVTVRL+PAPRG G+V+A + F +
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ 188
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
++++KEWVPVTKLGRLV+ G I +E IYL+SLPIK+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKE 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 133 bits (322), Expect = 3e-30
Identities = 63/72 (87%), Positives = 67/72 (93%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 474 PVRRGYWGNKIG 509
P+R+GYWGNKIG
Sbjct: 108 PLRQGYWGNKIG 119
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
KP+TVPCKVTG CGSV V LIPAPRGTG+VSA
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSA 151
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 607 VPKKLLQMAGVQDCYTS 657
VPKKLL MAG+ DCYTS
Sbjct: 153 VPKKLLMMAGIDDCYTS 169
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (320), Expect = 5e-30
Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 222 EHLLVF-FTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 398
EH+ +F + +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 399 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 166 EPHTIPTKVHGKCGSVHVRLIPAPRGAGIVAS 197
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 148 EDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
+D+ WVP TKLGRLV++G I LE I+LFSLPIK+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKE 80
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 129 bits (312), Expect = 5e-29
Identities = 59/87 (67%), Positives = 71/87 (81%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ F+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIG 509
AIR II+AKLSV+P+RRGYWG +G
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Score = 56.0 bits (129), Expect = 8e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFR 628
+PH++ K TGKCGSVTVRLIPAPRG+GIV++ ++ +
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQ 189
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +1
Query: 151 DQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
++K WVPVTKLGRLV+ G I +E I+L SLP+K+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKE 65
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (251), Expect = 1e-21
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGS-HTPS 524
RGAI AK ++ PVR G W G HT S
Sbjct: 113 RGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFF 625
KPHTV CK +GKCG+ V++IPAPRGTGI+S + F
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIF 175
Score = 35.9 bits (79), Expect = 0.86
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
++++ EW+P T +GRLV+ I LE I+ FS I++
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIRE 51
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 96.7 bits (230), Expect = 4e-19
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +3
Query: 345 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 506
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEI 114
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +2
Query: 494 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
G + RKPHTVP KVTG+CGSV VRLIPAPRGTG VSA
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSA 147
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 607 VPKKLLQMAGVQDCYTS 657
VPKKLL MAG+ DCYTS
Sbjct: 149 VPKKLLMMAGIDDCYTS 165
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 401
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
K + KEW+PVTKLGRLV++ I LE IYLFSLPIK+S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/90 (47%), Positives = 62/90 (68%)
Frame = -3
Query: 509 SDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTC 330
+DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT
Sbjct: 27 TDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTG 86
Query: 329 LFLYRHDL*NLIIQGRAEEEINDLESLIGK 240
L L HDL + ++Q A+EEI+DLE G+
Sbjct: 87 LLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 398
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 73.7 bits (173), Expect = 4e-12
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTI 130
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGS-HT 518
+ IIL KL ++PV RGY G+K HT
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +2
Query: 494 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
G + KPHTV CKVTG GSV++ LIPAPR T I SA
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSA 185
Score = 33.1 bits (72), Expect = 6.1
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 169 PVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
P +KLG LV++ I L IYLFSLPIK++
Sbjct: 51 PASKLGCLVKDE-IKSLGEIYLFSLPIKET 79
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ ++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 429 TAIR 440
AI+
Sbjct: 152 GAIQ 155
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +1
Query: 154 QKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
++EWVP+TKLGRLV+ G I LE+I+ FS+PIK+
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKE 94
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGSHTP 521
R AI AKLS++ VR G + G +P
Sbjct: 107 RKAIAHAKLSLIKVRVGCGSWECGCGSP 134
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 512 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRS 619
PH++P G CGSV V L+PAPRG G+V+ ++
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKA 169
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ I
Sbjct: 24 EIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTI 82
Query: 438 RGAIILAKLSVLPVRRG 488
R AI AKL+++PV RG
Sbjct: 83 RKAIDKAKLNMIPVMRG 99
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 518 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLR 616
+VP K+TG+ GS V L+PAP G G+V + + R
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGR 144
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +3
Query: 234 VFFTNQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 413
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 414 SKEVATAIRGAIILAKLSVLPVRRGYW 494
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 500 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQF 610
++ KP+T+ K +GK GSV V + PAP+GTGIV+++F
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKF 215
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = -3
Query: 497 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 318
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 317 RHDL*NLIIQGRAEEEINDLESL 249
R D+ N I+Q ++ +NDLE L
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ FE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 429 TAIRGAIILAKLSV 470
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 359
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
K + KEW+PVTKLGRLV++ I LE IYLFSLPIK+S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +2
Query: 500 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
Q R KVTG+CGSV VRLIPAPRGTGIVSA
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSA 149
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 607 VPKKLLQMAGVQDCYTS 657
VPKKLL MAG+ DCYTS
Sbjct: 151 VPKKLLMMAGIDDCYTS 167
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 67.3 bits (157), Expect = 3e-10
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 267 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 446
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 447 IILAKLSVLPVRRGYWGNKIGS-HTPS 524
IIL + S+ G+ GNKI HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFR 628
KPHTV C+VT SV V I APRGT I+SA + R
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLR 115
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 438 RGAIILAKLSVLPVRRG 488
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFRW 631
+PH++P KV GK GSV V L+PAP+GTG+V L++ +
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTY 170
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 157 KEWVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
+EW P T +G LV+EG I ++ ++ +LPI +
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITE 43
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 66.5 bits (155), Expect = 5e-10
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ FEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 429 TAIRGAIILAKL-SVLPVRRGYWGNKIGSHTPSLARSPASV 548
TA+ + + L S LP R Y GN I T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 321 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 500
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L + R
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSRSTLVQ 60
Query: 501 -KIGSHTPSL 527
K+ SH S+
Sbjct: 61 YKVTSHYGSV 70
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2
Query: 521 VPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSF 622
V KVT GSV V LIPAPRGTGIVSA L F
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKF 92
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 66.1 bits (154), Expect = 7e-10
Identities = 31/91 (34%), Positives = 55/91 (60%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ ++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGSHTP 521
AI+ AI AKL+++ ++RG + G P
Sbjct: 93 PAIKKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFR 628
KPHT+P V GK GSV+V L PAP+G G+ ++ R
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 438 RGAIILAKLSVLPVRR--GYWGNKIGSHTPSLAR 533
+ AI +AKL+++ V R G W ++ G T SL R
Sbjct: 149 QKAIDVAKLNIIEVDRGSGSWEDQPGG-TNSLTR 181
Score = 36.7 bits (81), Expect = 0.49
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 530 KVTGKCGSVTVRLIPAPRGTGIVSAQFLRS 619
K GK GSVTV + PAP+G G+ +A+ +R+
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRN 211
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +3
Query: 258 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 425
EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 426 ATAIRGAIILAKLSVLPVRRG 488
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 506 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 598
R+PH+VP V GK GSV VRLIP PRG G+V
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLV 166
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 282 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 461
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 462 LSVLPVRRG 488
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 503 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 601
D+K H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVA 193
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGSHTP 521
+ AI +AKL+++ V RG + G P
Sbjct: 98 QKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLR 616
+PHTV + GK GSV V L PAPRG G+ + +R
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVR 159
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 163 WVPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
W P T+LG+ V EG ID ++ LP+K+S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 359
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKDS 258
K + KEW+P TKLG LV++ I LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 530 KVTGKCGSVTVRLIPAPRGTGIVSA 604
KVTG+CGSV VRL APRGTGIVSA
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSA 149
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
+PH VPC+VTG+CGS+ V LIPAPRGTG VSA
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSA 183
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 315 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 494
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 495 GNKIGSH 515
G ++ H
Sbjct: 148 GKRLEPH 154
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 154 QKEWVPVTKLGRLVREGGIDKLESIYLFSLPIKDSRSLISSSARP 288
+ +W+P+TKLG LV+E I LE IY FSL ++ RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 282 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 461
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 462 LSVLPVRRG 488
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 503 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLR 616
D+K H+VP KV GK GSV + ++PAPRG G+V+ +R
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIR 179
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 437
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 438 RGAIILAKLSVLPVRRGYWGNKIGS-HT 518
+ AI L + + GY GNKIG+ HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 512 PHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSA 604
PHT+PC VT + V V L APRGTG VSA
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSA 160
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
+ FE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 429 TAIRGAIIL 455
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 279 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 458
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 459 KLSVL--PVRRGY 491
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 145 KEDQKEWVPVTKLGRLVREGGIDKLESIYLFSLPIK 252
K + KEW+PVTKLGRLV++ I LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +3
Query: 246 NQRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 425
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 426 ATAI 437
ATAI
Sbjct: 143 ATAI 146
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 518 TVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
TV CKVTG+C SV + LIP R I+SA
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTR--NIISA 188
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 467
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 468 VLPV 479
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 285 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 464
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 465 SVLPVRR 485
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +2
Query: 476 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 604
S ++ LG + K H V CKVTG CGSV V LIPA RGTGI SA
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSA 43
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +3
Query: 267 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 446
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 447 IILAKLSVLPV 479
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 321 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 488
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 512 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFR 628
PH++P +V GK GSV V L PAP+G GIV+ ++ FR
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 157 KEWVPVTKLGRLVREGGIDKLESI 228
+EW P TKLGRLV+EG I ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 282 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 461
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 462 LSVLPV 479
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +3
Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 401
+ ++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 36.3 bits (80), Expect = 0.65
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 169 PVTKLGRLVREGGIDKLESIYLFSLPIKD 255
PVTKLGRLV++G + ++ I+ F + IK+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKE 64
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 467
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 468 VLPVR 482
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 474 PV 479
+
Sbjct: 71 KI 72
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLR 616
K +T+P ++ GK G+ T+ + PA GTG+++ R
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASR 110
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 474 PV 479
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 273 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 452
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 453 LAKLSVLPV 479
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 474 --PVRRG 488
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 474 PV 479
V
Sbjct: 209 QV 210
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 446
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 474 PV 479
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 279 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 458
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 459 KLSVL--PVRRG 488
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +3
Query: 279 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 458
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 459 KLSVLPVRR 485
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 467
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 468 VLPVRRG 488
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.003
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 474 PVRRGYWGNKIGS--HTPSLARSPASVVL 554
V NKI S H S + A+V L
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANVFL 152
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 291 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 470
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 471 LPV 479
+ +
Sbjct: 91 VKI 93
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 476 SSKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRS 619
S+K+ L + K HT+P +V GK S V L P+ GTGI++ +RS
Sbjct: 85 SAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRS 132
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 467
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 468 VLPV 479
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 474 PV 479
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 474 PV 479
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 461
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 40.7 bits (91), Expect = 0.030
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 163 WVPVTKLGRLVREGGIDKLESIYLFSLPIKD 255
W PVTKLGRLV++G + ++ I+ F + IK+
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKE 65
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 603 ADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 511
A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 41 AEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 318 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 485
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 440
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 467
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 468 VLPVRR 485
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 449 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 351
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 440
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = -3
Query: 254 SLIGKENK*MLSSLSIPPSRTRRPSLVTGTHSFWS 150
SL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 19 SLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 288 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 467
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 468 VLPV 479
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.49
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 474 PV 479
V
Sbjct: 151 RV 152
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 291 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 440
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.86
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 300 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 479
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 607 VPKKLLQMAGVQDCYTS 657
VPKKLL MAG+ DCYTS
Sbjct: 13 VPKKLLMMAGIDDCYTS 29
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 318 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 485
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 285 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 464
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 465 SVLPVRR 485
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 276 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 455
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 456 AKLSVL 473
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 273 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 437
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3
Query: 285 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 464
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 465 SVLPVRR 485
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 518 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRS 619
++P +V G+ G+ V LIPA GTGI++ Q +R+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRA 123
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 3.5
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 FEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATA 434
F I DF G SL D+++ + + + QRT+ GH GL CS EVATA
Sbjct: 66 FTITDF-PGESLKDDLMMASGLGSRLLSSQRTK-----------GHSGLSSMCSGEVATA 113
Query: 435 IRGAIILAKL-SVLPVRRGYWGNKIGSHTPSL 527
I+ I + L S P+ R GN G PS+
Sbjct: 114 IQVLGITSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 357 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 509
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 300 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 446
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_P41846 Cluster: WBSCR14 protein homolog; n=2;
Caenorhabditis elegans|Rep: WBSCR14 protein homolog -
Caenorhabditis elegans
Length = 1009
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -2
Query: 651 VAVLYTSHLKKLLRNCADTIPVPRGAGISRTVTEPHLPVTLQGT 520
V++ + SH++++L N +P P + + T +P+LP LQ T
Sbjct: 475 VSLPHQSHVERILNNQPPLVPPPSRSNLLPTQNDPYLPQFLQST 518
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 175 TKLGRLVREGGIDKLESIYLFSLPIKDSRSLISSSA 282
TK+GRL I+ ++ +YLF PI ++R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -3
Query: 359 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEINDLESL 249
LE+CAL TC+ +Y HD+ ++ + +A+E+++D L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 172 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 14
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,890,892
Number of Sequences: 1657284
Number of extensions: 13982005
Number of successful extensions: 41485
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 39142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41333
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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