Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120262X.Seq
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   2.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   4.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   4.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.2  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 148 FIQNLWIVQRFYVSKR 195
           FI+N+W+   F+V+++
Sbjct: 118 FIKNIWVPDTFFVNEK 133


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 236 AFGSQHTSASSNSSGNMLQRPA 301
           +FG  ++  SS SSG++ Q PA
Sbjct: 57  SFGQVNSPPSSTSSGSLGQFPA 78


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 311 QTKALVVVTCCRTNWTMQTC 252
           QTK L  +  C T+ TM  C
Sbjct: 238 QTKKLATIVGCGTDGTMIKC 257


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 311 QTKALVVVTCCRTNWTMQTC 252
           QTK L  +  C T+ TM  C
Sbjct: 238 QTKKLATIVGCGTDGTMIKC 257


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 311 QTKALVVVTCCRTNWTMQTC 252
           QTK L  +  C T+ TM  C
Sbjct: 238 QTKKLATIVGCGTDETMIKC 257


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 311 QTKALVVVTCCRTNWTMQTC 252
           QTK L  +  C T+ TM  C
Sbjct: 238 QTKKLATIVGCGTDETMIRC 257


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 311 QTKALVVVTCCRTNWTMQTC 252
           QTK L  +  C T+ TM  C
Sbjct: 238 QTKKLATIVGCGTDETMIKC 257


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 316 VSKQKRWSL 290
           VSKQKRW L
Sbjct: 268 VSKQKRWEL 276


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 267 PIRPATCYNDQR 302
           P+RPA C  D R
Sbjct: 138 PVRPAACTPDSR 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,701
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)