Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120262X.Seq
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48147| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 30 1.7
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_51003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28686| Best HMM Match : zf-C2HC (HMM E-Value=4.7) 29 3.9
SB_54120| Best HMM Match : Chlam_PMP (HMM E-Value=1.7e-06) 28 5.2
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.2
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_48734| Best HMM Match : DUF237 (HMM E-Value=5.2) 28 6.9
SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06) 28 6.9
SB_28641| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_47828| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_37487| Best HMM Match : RVT_1 (HMM E-Value=0.03) 27 9.1
SB_29592| Best HMM Match : DUF1528 (HMM E-Value=6.8) 27 9.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 27 9.1
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 27 9.1
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 27 9.1
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.1
>SB_48147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = -2
Query: 577 CRSPTRHASAPRSCLGNCTDILFHRNPRSVGERKIRIGRSGVQTQRAKEHAAIQNRFNDR 398
CR H+ A C CTD+LF R+P + + + Q R + QN ND
Sbjct: 96 CRISVSHSLA--LCETRCTDVLFSRDPGTSVSHHLCVAAGSTQGTRHMPPSTFQN--NDT 151
Query: 397 AR 392
R
Sbjct: 152 VR 153
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 500 STFRRREKNTHRAKRRANPTS*RTCRNPKPFQRPR 396
ST RR K+THR K+ + R KP +RPR
Sbjct: 508 STTRRPRKSTHRPKKPTRRPRKNSPRTRKPTRRPR 542
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 500 STFRRREKNTHRAKRRANPTS*RTCRNPKPFQRPR 396
ST RR K+THR K+ + R KP +RPR
Sbjct: 145 STTRRPRKSTHRPKKPTRRPRKNSPRTRKPTRRPR 179
>SB_51003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 250 AHVCIVQFVRQHVTTTSAFVWKRTRKSRQRNQRHHV 357
A + + V HVT A++W R R+S +R RH+V
Sbjct: 8 ALLLVAMIVVDHVTEARAWLWDRRRRSSRR--RHYV 41
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 150 EYLCLNANETTALDSTRSFSHNC*IYIFLITTFAL-RSTTQ 31
EYLCLNA E T SF+H + + + +F+ R T Q
Sbjct: 8 EYLCLNATERPVSIQTLSFAH---VKVLAVNSFSFWRGTNQ 45
>SB_28686| Best HMM Match : zf-C2HC (HMM E-Value=4.7)
Length = 58
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 574 RSPTRHASAPRSCLGNC---TDILFHRNPRSVGERKIRIGRSGV 452
R+ + H PR C G+ T++ FHR P + +IR RSG+
Sbjct: 16 RTTSFHCCVPR-CTGDSRYNTELTFHRIPSRPSDEEIRSERSGL 58
>SB_54120| Best HMM Match : Chlam_PMP (HMM E-Value=1.7e-06)
Length = 935
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 577 CRSPTRHASAPRSCLGNCTDILFHRNPRSVGERKIRIGR 461
CRSP + SCLGN T L R P R R+ R
Sbjct: 825 CRSPPPDETGYNSCLGNRTGTLCGRGPWINNPRSHRLLR 863
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN I P D+A++L
Sbjct: 323 KFWNYVKSRRSEVSDIPSLRSNDGISISPRDKAQVL 358
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN I P D+A++L
Sbjct: 1713 KFWNYVKSRRSEVSDIPSLRSNDGISISPRDKAQVL 1748
>SB_48734| Best HMM Match : DUF237 (HMM E-Value=5.2)
Length = 407
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 508 EIKCPYNYRDTTVEQ 552
EIKCPY +R+TT+ +
Sbjct: 363 EIKCPYKHRNTTIAE 377
>SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06)
Length = 772
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 508 EIKCPYNYRDTTVEQ 552
EIKCPY +R+TT+ +
Sbjct: 606 EIKCPYKHRNTTIAE 620
>SB_28641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 491 RRREKNTHRAKRRANPTS*RTCRNPK 414
RR + R +RRA P R CR P+
Sbjct: 11 RRHSRRRRRPRRRARPRRRRPCRRPR 36
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 313 KRTRKSRQRNQRHHVRPHARNYKK*NYER 399
K R+ RQ +QR H R H R +++ + R
Sbjct: 172 KHQRRQRQEHQRRHRRQHQRRHRQKHQRR 200
>SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN + P D+A++L
Sbjct: 109 KFWNYVKSRRSEVSDIPSLRSNDGVSISPRDKAQVL 144
>SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -3
Query: 252 CCDPN-AIASTAHFCFVPWWPFRHVKSLHDPKVLD 151
C PN IAS H F W F ++K+ H+ + L+
Sbjct: 598 CSVPNETIASVLHQTFSASWSFSNIKTTHELRFLN 632
>SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN + P D+A++L
Sbjct: 51 KFWNYVKSRRSEVSDIPSLRSNDGVSISPRDKAQVL 86
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN + P D+A++L
Sbjct: 33 KFWNYVKSRRSEVSDIPSLRSNDGVSISPRDKAQVL 68
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF NYVK+ + + RSN + P D+A++L
Sbjct: 62 KFWNYVKSRRSEVSDIPSLRSNDGVSISPRDKAQVL 97
>SB_47828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 132 RSNKDIHPKPLDRAEILRVEKATRGQSKNELWTLLRLDRSTRLHRPIRPATCYNDQR 302
RS++ +HP+ +L V K G +K+ W LL LH +R + D R
Sbjct: 158 RSDERVHPRERQNCCLL-VCKTLWGLNKDYKWNLLAGTHGANLHSHLRTSPSLPDLR 213
>SB_37487| Best HMM Match : RVT_1 (HMM E-Value=0.03)
Length = 347
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF YV+ + RS+ IH P D+AE+L
Sbjct: 74 KFWGYVRNCRSEGQGIPALRSDDSIHVSPKDKAEVL 109
>SB_29592| Best HMM Match : DUF1528 (HMM E-Value=6.8)
Length = 129
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 481 RKIRIGRSGVQTQRAKEHAAIQNRFNDRARNFIFYNFAH 365
+KIR RSG K H Q F + + F Y AH
Sbjct: 29 KKIRRNRSGAALLMTKRHLIAQGDFIEGLKTFAEYRKAH 67
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF YV+ + RS+ IH P D+AE+L
Sbjct: 316 KFWGYVRNCRSEGQGIPALRSDDSIHVSPKDKAEVL 351
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = -3
Query: 300 AGRCNMLPDELDDADVCCDPNAIASTAHFCFVPWWPFRHVKSLHDP 163
AG+C M+ + + C D + + + VP P+R ++ + P
Sbjct: 165 AGKCAMICEARECVSTCSDSDCVYKESGIRVVPTSPYRPMRQCNKP 210
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = -3
Query: 300 AGRCNMLPDELDDADVCCDPNAIASTAHFCFVPWWPFRHVKSLHDP 163
AG+C M+ + + C D + + + VP P+R ++ + P
Sbjct: 165 AGKCAMICEARECVSTCSDSDCVYKESGIRVVPTSPYRPMRQCNKP 210
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF YV+ + RS+ IH P D+AE+L
Sbjct: 568 KFWGYVRNCRSEGQGIPALRSDDSIHVSPKDKAEVL 603
>SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF YV+ + RS+ IH P D+AE+L
Sbjct: 516 KFWGYVRNCRSEGQGIPALRSDDSIHVSPKDKAEVL 551
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 KFNNYVKTIELSRAQLSRWRSNKDIHPKPLDRAEIL 182
KF YV+ + RS+ IH P D+AE+L
Sbjct: 652 KFWGYVRNCRSEGQGIPALRSDDSIHVSPKDKAEVL 687
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,928,991
Number of Sequences: 59808
Number of extensions: 458131
Number of successful extensions: 1349
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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