Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120261.Seq
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82052-7|CAD89750.1|  294|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U39654-3|AAA80406.1|  490|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U39654-2|AAM51505.1|  510|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.        28   6.4  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AF067607-4|AAF98610.2|  390|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z82052-7|CAD89750.1|  294|Caenorhabditis elegans Hypothetical
           protein T25E12.12 protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = +3

Query: 447 KRSNRFALKPPYKMHKNTVQREFDLVRFALQIDITSAYGVDEYTDNCVKITTAPLSFHVF 626
           KR+ RF      + +  T+Q  F  VRF + ID  S        D  +K  +   +  ++
Sbjct: 183 KRAKRFVGSGDLEAYSITIQHLFHFVRFEVHIDRFSIEDAVSIRDKLLKSASFE-NCTLY 241

Query: 627 FVNVRYYETTLQRGPLH 677
           F    Y E T   GP++
Sbjct: 242 FPQTDYLEITKIFGPMY 258


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 231  VTAAPPVNTNKPPFSQTTASKQSLINANFA 142
            +  +PP NT KPP   TTA++ + + A  A
Sbjct: 1112 ILKSPPRNTKKPPSRPTTATRPTAVAARTA 1141


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 231  VTAAPPVNTNKPPFSQTTASKQSLINANFA 142
            +  +PP NT KPP   TTA++ + + A  A
Sbjct: 1112 ILKSPPRNTKKPPSRPTTATRPTAVAARTA 1141


>U39654-3|AAA80406.1|  490|Caenorhabditis elegans Hypothetical
           protein C56G3.1a protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
 Frame = +1

Query: 259 SALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMS------NPLVMLK 420
           +A   + + + GLC +K F  LQT+L++     Y E+   T  I +S      N LV++ 
Sbjct: 17  NASNYLTYPFDGLCLQKFFYQLQTSLRRFTP--YEEIIYTTVYIIISVAAVIGNGLVIMA 74

Query: 421 CYQNGAYRLNGQIDLHLNRHI-KCIKTQYNVSLIWL 525
             +    R N  + L LN  +   I    N+  +WL
Sbjct: 75  VVRKKTMRTNRNV-LILNLALSNLILAITNIPFLWL 109


>U39654-2|AAM51505.1|  510|Caenorhabditis elegans Hypothetical
           protein C56G3.1b protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
 Frame = +1

Query: 259 SALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMS------NPLVMLK 420
           +A   + + + GLC +K F  LQT+L++     Y E+   T  I +S      N LV++ 
Sbjct: 37  NASNYLTYPFDGLCLQKFFYQLQTSLRRFTP--YEEIIYTTVYIIISVAAVIGNGLVIMA 94

Query: 421 CYQNGAYRLNGQIDLHLNRHI-KCIKTQYNVSLIWL 525
             +    R N  + L LN  +   I    N+  +WL
Sbjct: 95  VVRKKTMRTNRNV-LILNLALSNLILAITNIPFLWL 129


>Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical
           protein F45D3.5 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 208 VNWRRGCDMPYRRRRLKSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQH 357
           +NW+R  +  Y   R+K      D+ YYGL ++       +N +  VD+H
Sbjct: 539 LNWQRSANQEYAAARVKLG----DYYYYGLGTEVDHSLAFSNYKMAVDRH 584


>Z74474-1|CAA98954.2|  566|Caenorhabditis elegans Hypothetical
           protein K10C8.1 protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = +1

Query: 256 KSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNG 435
           K  L  +  D    C++K F   +  L       Y   +V + QI +   +V  KCYQ+ 
Sbjct: 110 KFNLNQVFMDGVEFCTRKEFKKFERALLAGTAASYLSREVKS-QIELLKVMVHEKCYQST 168

Query: 436 AYRLNGQIDLHLNRHIKCIKTQYNVSL 516
           +Y +  + D  + +    +K   +VSL
Sbjct: 169 SYHITHRTDEPMQKIPLKMKPNSSVSL 195


>U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 208 VNWRRGCDMPYRRRRLKSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQH 357
           +NW+R  +  Y   R+K      D+ YYGL ++       +N +  VD+H
Sbjct: 539 LNWQRSANQEYAAARVKLG----DYYYYGLGTEVDHSLAFSNYKMAVDRH 584


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 567  DEYTDNCVKITTAPLSFHVFFVNVRYYETTLQRGPLHQKFFASWKRISRVGV 722
            +E+    ++     ++ H+F  +  + ET     PLH  FFA  + +S  GV
Sbjct: 997  NEFATAALRFAHTLINTHLFRFDKDFKETKQGHLPLHNAFFAPERLVSEGGV 1048


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 567  DEYTDNCVKITTAPLSFHVFFVNVRYYETTLQRGPLHQKFFASWKRISRVGV 722
            +E+    ++     ++ H+F  +  + ET     PLH  FFA  + +S  GV
Sbjct: 997  NEFATAALRFAHTLINTHLFRFDKDFKETKQGHLPLHNAFFAPERLVSEGGV 1048


>AF067607-4|AAF98610.2|  390|Caenorhabditis elegans Hypothetical
           protein C18H7.4 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -2

Query: 695 RSEKFLMQRSALKGRFIIAHVDKKHVERQRGCGYFNAV 582
           + EK +++R+  KG+F + H D  + ++Q G G +  V
Sbjct: 100 KGEKVILKRAIAKGKFQLMHTD-VNFKKQIGSGAYGTV 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,886,884
Number of Sequences: 27780
Number of extensions: 349908
Number of successful extensions: 1131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)