Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120260.Seq
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    28   0.039
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   1.9  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 0.039
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 294 INKILHEFDDIYSIGKFQ-SKNALLQILGRIT 202
           IN +L+ + D  + G F  +K  LLQI+G +T
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVT 334


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
          protein protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 60 YITRIHPLRNANKNLI 13
          Y+   HPL  +NKN I
Sbjct: 45 YVKHFHPLALSNKNAI 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,948
Number of Sequences: 336
Number of extensions: 1709
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)