Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120259.Seq
(737 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 29 0.11
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 25 1.8
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 25 1.8
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 25 3.2
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 25 3.2
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 4.3
AY748839-1|AAV28187.1| 169|Anopheles gambiae cytochrome P450 pr... 24 4.3
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 4.3
AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein. 23 7.4
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 9.8
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 29.5 bits (63), Expect = 0.11
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 416 TRFRDGSQIVHQIGLGHTNTGIDDRKSALVLVG 318
T+ R+GS I HQ N + DR+ +L+L G
Sbjct: 55 TQNRNGSPINHQGNAASANVAVADRQQSLILAG 87
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 236 FTLPPDSGEKLSLGVTILL 254
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 268 FTLPPDSGEKLSLGVTILL 286
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVLHVKEDLAEFMEEHKITE 688
FT+ PDSGE L G I+ V + + + H IT+
Sbjct: 253 FTLPPDSGEKLTLGLTIL--VSQTVFSLLVGHVITK 286
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 253 FTLPPDSGEKLTLGVTILL 271
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 24.2 bits (50), Expect = 4.3
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Frame = +2
Query: 476 RCWLLLQLLGRDRVTVHSKHN------DDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVL 637
R L+ + +G VH ++N DD Y W G VR G L R K L
Sbjct: 44 RALLIYERMGGSWSEVHKRNNFFAVSNDDASYPWAVYDDGLLAVRKVKGFVLYRWNKKEL 103
Query: 638 HVKEDLAEFMEEH 676
+ A++ +E+
Sbjct: 104 NELLVAAKYHDEY 116
>AY748839-1|AAV28187.1| 169|Anopheles gambiae cytochrome P450
protein.
Length = 169
Score = 24.2 bits (50), Expect = 4.3
Identities = 21/81 (25%), Positives = 30/81 (37%)
Frame = -1
Query: 554 RIARRHCV*SEQSRGRDQVTGVEANTELSNHADVGTCLKSLHESFSTRFRDGSQIVHQIG 375
R+ V R D+V G L + + +L E+ S I H++
Sbjct: 18 RLLHNPPVIERMQREIDEVVGHGRLPTLDDRTQLAYTEATLREAMRIDTLVPSGIAHRVQ 77
Query: 374 LGHTNTGIDDRKSALVLVGND 312
T G D K LVL+G D
Sbjct: 78 EDTTLRGYDLPKDTLVLIGLD 98
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 24.2 bits (50), Expect = 4.3
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 555 CGNLLQEARSQSAQTAVSPLVEVQR--SSFTSKRTWQNSWKNTKSQR 689
C L +++++ A E + S S R WQN W N+ + R
Sbjct: 876 CITLEEDSKNFRKSRAGESFTETAKKASRQASMRQWQNEWSNSLNGR 922
>AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein.
Length = 190
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +2
Query: 311 DHSQQERGHSYDHRYRYWYDQGRFGEQF 394
D +QE G ++DH +W F F
Sbjct: 34 DEQKQELGLNFDHDGEFWMSYRDFTRYF 61
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 111 CLHFFRHFLYCFLFNS 64
C F HF Y F F+S
Sbjct: 945 CFRLFNHFYYLFDFDS 960
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,899
Number of Sequences: 2352
Number of extensions: 18683
Number of successful extensions: 47
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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