Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120259.Seq
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 88 5e-18
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 82 5e-16
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 82 5e-16
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 82 5e-16
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.1
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.1
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.4
AF016678-2|AAB66153.1| 432|Caenorhabditis elegans Hypothetical ... 30 1.5
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.0
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 155 bits (376), Expect = 3e-38
Identities = 73/86 (84%), Positives = 83/86 (96%)
Frame = +3
Query: 252 QYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 431
+Y++LT+PS+LD+GKEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFM
Sbjct: 48 RYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFM 107
Query: 432 EALQAGADISMIGQFGVGFYSSYLVA 509
EALQAGADISMIGQFGVGFYS++LVA
Sbjct: 108 EALQAGADISMIGQFGVGFYSAFLVA 133
Score = 115 bits (276), Expect = 4e-26
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = +2
Query: 509 DRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMEEHKITE 688
D+V V SK+NDD+ Y WESSAGGSF VRP + + RGTKIV+H+KED +F+EE KI E
Sbjct: 134 DKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKE 193
Query: 689 IVKKHSQFIGYPIKLM 736
IVKKHSQFIGYPIKL+
Sbjct: 194 IVKKHSQFIGYPIKLV 209
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 127 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 252
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKI
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKI 47
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 88.2 bits (209), Expect = 5e-18
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Frame = +3
Query: 261 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 440
SLTDP +L +E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+ L
Sbjct: 107 SLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKL 166
Query: 441 QAGADIS-----MIGQFGVGFYSSYLVA 509
A S +IGQFGVGFY+++LVA
Sbjct: 167 MDTATSSDQQQDLIGQFGVGFYAAFLVA 194
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +2
Query: 509 DRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMEEHKIT 685
DRV V +K+NDD+QY+WES + SFT+ D G L RGT+I L++KE+ A+F+E +
Sbjct: 195 DRVVVTTKNNDDDQYIWESDS-ASFTISKDPRGNTLKRGTQITLYLKEEAADFLEPDTLK 253
Query: 686 EIVKKHSQFIGYPIKL 733
+V K+SQFI + I L
Sbjct: 254 NLVHKYSQFINFDIFL 269
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 118 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKISM 258
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKI +
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRL 105
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +3
Query: 306 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 486 FYSSYLVATA*LFTLNTMTTSNTCG 560
FYS+++VA + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 91 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 249
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +3
Query: 306 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 486 FYSSYLVATA*LFTLNTMTTSNTCG 560
FYS+++VA + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 91 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 249
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +3
Query: 306 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 485
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 486 FYSSYLVATA*LFTLNTMTTSNTCG 560
FYS+++VA + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 91 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 249
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 305 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 466
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 305 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 466
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +2
Query: 326 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 466
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.4
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +2
Query: 293 QRAVHQDHSQQERGHSYDH 349
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>AF016678-2|AAB66153.1| 432|Caenorhabditis elegans Hypothetical
protein K07E8.7 protein.
Length = 432
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = +2
Query: 542 DEQYVWESSAG------GSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMEEHKITEIVKKH 703
DE+ V E G G VRPD + R K+ + + + E T ++ H
Sbjct: 241 DEEQVCEQPIGPLVISMGIQCVRPDGKDAKSRFRKLWSDGTQSVVQVHIETGRTHQIRVH 300
Query: 704 SQFIGYPI 727
SQF+G+PI
Sbjct: 301 SQFLGHPI 308
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 320 QQERGHSYDHRYRYWYDQGRFGEQFGN 400
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 437 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 324
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,692,348
Number of Sequences: 27780
Number of extensions: 407669
Number of successful extensions: 1358
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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