Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120259.Seq
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.56
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.98
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.98
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.98
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 4.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 4.0
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.2
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 5.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.1
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.56
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 253 FTLPPDSGEKLSLGVTILL 271
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 216 FTLPPDSGEKLTLGVTILL 234
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 284 FTLPPDSGEKLTLGVTILL 302
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 0.98
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 581 FTVRPDSGEPLGRGTKIVL 637
FT+ PDSGE L G I+L
Sbjct: 284 FTLPPDSGEKLTLGVTILL 302
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 667 HEFCQVLFDVKDDLCTSTKGLTAVWADCER 578
+ F L +++ D+C+ KGL A+ +R
Sbjct: 338 YAFALALHNLQKDVCSKLKGLCPSMANYDR 367
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 667 HEFCQVLFDVKDDLCTSTKGLTAVWADCER 578
+ F L +++ D+C+ KGL A+ +R
Sbjct: 428 YAFALALHNLQKDVCSKLKGLCPSMANYDR 457
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 464 DWTVRCWLLLQLLGRDRVTVHSKHNDDEQYV 556
D + CW + L R + + +K+ND Q++
Sbjct: 321 DTALGCWNENRPLKRRNIEIVAKNNDTLQFI 351
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 503 GRDRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPL 613
G+ RVT+ +E+Y+ S G F + G+ L
Sbjct: 263 GQVRVTIKQPDTPEEKYIRTLSKGDFFGEKALQGDDL 299
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 63 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 95
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 616 SRYKDRPSRQRGLGRIHGRTQNHRDRKETFPVH 714
SR + R R+RG R H +H + PV+
Sbjct: 312 SRERSRDRRERGRSREHRIIPSHYIEQIPVPVY 344
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 659 EFMEEHKITEIVKKHSQFIGYPIK 730
++ EE+K+ E+ + S F+G +K
Sbjct: 404 KYYEEYKMYELGELASSFVGPKVK 427
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,384
Number of Sequences: 438
Number of extensions: 5055
Number of successful extensions: 34
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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