Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120258.Seq
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.6  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 342 DISLYHVDTGQDYRRLLERSYKII--VLLTVLDAWP 443
           D+S        +Y++LL+RSY II  VL ++L   P
Sbjct: 127 DVSFIKAGFRLEYKQLLKRSYLIISFVLFSLLARVP 162


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 342 DISLYHVDTGQDYRRLLERSYKII--VLLTVLDAWP 443
           D+S        +Y++LL+RSY II  VL ++L   P
Sbjct: 127 DVSFIKAGFRLEYKQLLKRSYLIISFVLFSLLARVP 162


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 659 REHFQ*AQEFSRFLEPSGMFETEHTRVTRS 748
           R+H Q   + ++ + P  M+  EHT V  +
Sbjct: 298 RKHTQQHYQMNQNMYPGEMYNPEHTTVNEA 327


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 207 HK*TETHFHSTYPNNFNGTDARNN 278
           H   E HF S++ NN +   A+ N
Sbjct: 89  HDRHERHFESSFGNNLHSEKAKFN 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 659 REHFQ*AQEFSRFLEPSGMFETEHTRVTRS 748
           R+H Q   + ++ + P  M+  EHT V  +
Sbjct: 246 RKHTQQHYQMNQNMYPGEMYNPEHTTVNEA 275


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 659 REHFQ*AQEFSRFLEPSGMFETEHTRVTRS 748
           R+H Q   + ++ + P  M+  EHT V  +
Sbjct: 429 RKHTQQHYQMNQNMYPGEMYNPEHTTVNEA 458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,643
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)