Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120257.Seq
(828 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 136 6e-31
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 133 6e-30
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 131 2e-29
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 130 5e-29
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 128 2e-28
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 117 4e-25
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 114 2e-24
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 113 4e-24
UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20... 97 6e-19
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 92 2e-17
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 91 3e-17
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 84 5e-15
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 66 1e-09
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 61 4e-08
UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophy... 60 7e-08
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 53 8e-06
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 52 1e-05
UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascoviru... 52 2e-05
UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;... 50 9e-05
UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep: B... 49 1e-04
UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep: B... 49 2e-04
UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA st... 48 4e-04
UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11; Avi... 47 5e-04
UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura granulovi... 47 7e-04
UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A ... 46 9e-04
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 46 0.001
UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum granulovir... 46 0.002
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 45 0.002
UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Re... 45 0.003
UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA stage... 44 0.004
UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium 19... 44 0.004
UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1; Strep... 44 0.004
UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1; ... 44 0.004
UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep: ... 44 0.006
UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage... 44 0.006
UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2; Cana... 43 0.008
UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2; Desul... 43 0.008
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 43 0.011
UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura granulovi... 42 0.014
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 42 0.014
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.014
UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep: ... 42 0.014
UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A ... 42 0.019
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 42 0.019
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 42 0.019
UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Re... 42 0.019
UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata NPV-A|... 42 0.025
UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2; ... 42 0.025
UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3; Cana... 41 0.033
UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1; ... 41 0.033
UniRef50_Q185G9 Cluster: Putative phage-related regulatory prote... 41 0.033
UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1; H... 41 0.033
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 41 0.044
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 40 0.058
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 40 0.058
UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8; Pa... 40 0.058
UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovir... 40 0.076
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 40 0.076
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.076
UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium bo... 40 0.076
UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1; ... 40 0.10
UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein; ... 40 0.10
UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1; R... 40 0.10
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 40 0.10
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 40 0.10
UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22; Gammaprote... 39 0.13
UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio vul... 39 0.13
UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4; root... 39 0.13
UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium ther... 39 0.13
UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;... 39 0.18
UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.18
UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.18
UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3; C... 39 0.18
UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.18
UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococc... 39 0.18
UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protei... 38 0.23
UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus ... 38 0.23
UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4; ro... 38 0.23
UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein; ... 38 0.23
UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: ... 38 0.31
UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2; ... 38 0.31
UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Re... 38 0.31
UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum granuloviru... 38 0.41
UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2; Le... 38 0.41
UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans SPH-... 38 0.41
UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep: B... 37 0.71
UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas ... 37 0.71
UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium... 37 0.71
UniRef50_A4LXX6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.71
UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium ther... 37 0.71
UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites nucl... 36 1.2
UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticars... 36 1.2
UniRef50_Q629R8 Cluster: Polysaccharide deacetylase family prote... 36 1.2
UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium ther... 36 1.2
UniRef50_A7IY79 Cluster: Putative antirepressor; n=1; Corynebact... 36 1.2
UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium ... 36 1.6
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 36 1.6
UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent viru... 35 2.2
UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein; ... 35 2.2
UniRef50_A5DCD7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit bet... 35 2.2
UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascoviru... 35 2.9
UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella fastidios... 34 3.8
UniRef50_Q9YVP7 Cluster: ORF MSV195 ALI motif gene family protei... 34 5.0
UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;... 34 5.0
UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage prot... 34 5.0
UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 se... 34 5.0
UniRef50_A1YJ07 Cluster: 38.7 kDa protein; n=6; Nucleopolyhedrov... 33 6.6
UniRef50_A6FZT3 Cluster: Sensor protein; n=1; Plesiocystis pacif... 33 6.6
UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep: Anti-re... 33 6.6
UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear p... 33 8.7
UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q65943 Cluster: E1B protein, large T-antigen; n=3; Cani... 33 8.7
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 136 bits (329), Expect = 6e-31
Identities = 72/107 (67%), Positives = 84/107 (78%), Gaps = 3/107 (2%)
Frame = +1
Query: 517 EMIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEF 696
EMIVARRDAETAR+D L+ R+ADIAQDVI KPSNPQL H+LAVC++GNNEF
Sbjct: 181 EMIVARRDAETARRDM-------VVLSTRIADIAQDVITKPSNPQLLHTLAVCEIGNNEF 233
Query: 697 AFLRPQKRSLGRS---LKRLGF*RRIFSSDYVPNSMNVLNKVKEAIP 828
AFLRPQKRSL RS L+R G ++++DYVPNSMNVLNKVKE +P
Sbjct: 234 AFLRPQKRSLQRSLNNLRRNGQADLVYANDYVPNSMNVLNKVKEHVP 280
Score = 105 bits (253), Expect = 1e-21
Identities = 59/112 (52%), Positives = 74/112 (66%), Gaps = 17/112 (15%)
Frame = +2
Query: 236 KAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
K G P L+ T+LITKSGVIQLIMKSKLPYA+ELQEWLLEEVIPQVLCTGKY PAV +
Sbjct: 91 KKGHPLFLYDQTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAVANN 150
Query: 416 ------TNDVIAKI-----------DDLTQKLTVANADLAEANRSLILLPTK 520
+N++I K+ D + Q++ VA D A R +++L T+
Sbjct: 151 SECLSKSNEMILKMSQELILAKQNSDAMIQEMIVARRDAETARRDMVVLSTR 202
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
M QVKIG FKFGED F LRYV+G+++ V FVAKDIAS LKY A+ HVD KYK F
Sbjct: 1 MPQVKIGVFKFGEDKFKLRYVVGNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKCYF 60
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 133 bits (321), Expect = 6e-30
Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
Frame = +1
Query: 499 AHFVANE-MIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVC 675
A VANE +I A + A Q+ A + +ANRMADIAQDVIAKPS+PQL HSLAVC
Sbjct: 177 ALIVANENLITANNNLNVANQNLHEANQTIGHMANRMADIAQDVIAKPSDPQLLHSLAVC 236
Query: 676 DVGNNEFAFLRPQKRSLGRSLKRLGF*RR--IFSSDYVPNSMNVLNKVKEAIP 828
+G +++AFLRPQKRSL RSL RL R +F SDYVPN++NVLNKVKE +P
Sbjct: 237 SLGGDQYAFLRPQKRSLQRSLNRLSVDERDIVFKSDYVPNAVNVLNKVKETLP 289
Score = 114 bits (274), Expect = 3e-24
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 436
L PHT+LITK GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCTGKYAPAVEMDT+ +K
Sbjct: 82 LQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKYAPAVEMDTDIQESK 141
Query: 437 IDDLTQKLTVANADLAEANRSLILLPT 517
I + T K +A D N + +L+ T
Sbjct: 142 ILN-TYKQDIAEKDEKIQNLTTVLIET 167
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +3
Query: 21 VKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHA 200
VKIG FKFGEDTF LRYV+ + + V+FVAKD+AS+LK+ N ++A++ HVD KYKST+E
Sbjct: 5 VKIGNFKFGEDTFRLRYVV-EREIVKFVAKDVASNLKHQNTKKAVKDHVDEKYKSTYEMG 63
Query: 201 DQIQHHAPDSVAKQGDPL 254
++ + V K GD L
Sbjct: 64 KEVVTSNLEPVNK-GDSL 80
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 131 bits (316), Expect = 2e-29
Identities = 67/109 (61%), Positives = 83/109 (76%), Gaps = 3/109 (2%)
Frame = +1
Query: 511 ANE-MIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN 687
AN+ + VA + A AR++TA+LANRMADIAQDVIAKP+NPQL HSLAVC +G
Sbjct: 222 ANQNLTVANQGLLQAFNIVNEARKDTAELANRMADIAQDVIAKPANPQLLHSLAVCSMGG 281
Query: 688 NEFAFLRPQKRSLGRSLKRLGF*RR--IFSSDYVPNSMNVLNKVKEAIP 828
+++AF+RPQKRSL RSL RL R ++ SDYVPN +NVLNKVKEA+P
Sbjct: 282 DQYAFVRPQKRSLKRSLDRLAVEERDIVYKSDYVPNGVNVLNKVKEALP 330
Score = 34.7 bits (76), Expect = 2.9
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I ++G+ +LI SK+P A E + W+ +++ ++ TG+Y
Sbjct: 120 INRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEY 158
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 130 bits (313), Expect = 5e-29
Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
Frame = +1
Query: 514 NEMIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNE 693
+ + VA + A +AR+ETA++A RMADIAQDVIAKPS+PQL HSLAVC +G ++
Sbjct: 365 HNLAVANQGLLKAFDVVNDARKETAEIAKRMADIAQDVIAKPSDPQLLHSLAVCSMGGDQ 424
Query: 694 FAFLRPQKRSLGRSLKRLGF*RR--IFSSDYVPNSMNVLNKVKEAIP 828
+AFLRPQKRSL RSL RL + ++ SDYVPNSMNVLNKVKE +P
Sbjct: 425 YAFLRPQKRSLKRSLDRLSVDEKDIVYKSDYVPNSMNVLNKVKERLP 471
Score = 44.4 bits (100), Expect = 0.004
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 409
LHP + I ++G+ +LI S++P A E ++W+ +++P++ GKY A +
Sbjct: 254 LHPMSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMAAD 304
Score = 35.5 bits (78), Expect = 1.6
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDV 427
P ++ T I ++GV +LI S +P A Q W +++P + G+Y A D
Sbjct: 74 PRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGEYKMA-----RDA 128
Query: 428 IAKIDDLTQKLTVANADLAEA 490
A I + VA D AEA
Sbjct: 129 PADIAHGMNAVHVATNDGAEA 149
Score = 33.1 bits (72), Expect = 8.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 102 VAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSV 233
VA A +L Y N RAIRVHV K + +E + DSV
Sbjct: 27 VANPFAEALSYSNVNRAIRVHVSEKNQQNYEEFKSDRVGLTDSV 70
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 128 bits (309), Expect = 2e-28
Identities = 58/81 (71%), Positives = 69/81 (85%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
M+QVKIG+FKFG+DTFTLRYVLG EQ V+FVAKDIAS+LK+ NC A+R HVDGKYKSTF
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLGGEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKSTF 60
Query: 192 EHADQIQHHAPDSVAKQGDPL 254
EH + H A +++AKQGDPL
Sbjct: 61 EHGEIRSHLASNALAKQGDPL 81
Score = 106 bits (254), Expect = 8e-22
Identities = 50/76 (65%), Positives = 56/76 (73%)
Frame = +2
Query: 236 KAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
K G P LHPHTVL+TK GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCTGKY PA++
Sbjct: 76 KQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKYDPAIKHQ 135
Query: 416 TNDVIAKIDDLTQKLT 463
+ D L + T
Sbjct: 136 QEETKRMTDRLIKVFT 151
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 117 bits (281), Expect = 4e-25
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = +1
Query: 571 ARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLG 750
A LANRMADIAQDVIAKPS+PQL HSLAVC +G ++AF+RPQKRSL RSL RL
Sbjct: 384 ANERIENLANRMADIAQDVIAKPSDPQLLHSLAVCALGEGQYAFVRPQKRSLKRSLDRLS 443
Query: 751 F*RR--IFSSDYVPNSMNVLNKVKEAIP 828
+F S+YVPN+MNVLNKVKE++P
Sbjct: 444 IDESQILFKSNYVPNAMNVLNKVKESLP 471
Score = 46.8 bits (106), Expect = 7e-04
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2
Query: 251 ADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAP 400
+ LHP T I K+G+ +LI SK+P A E ++W+ +++P + +Y+P
Sbjct: 114 SSLHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLCQQREYSP 163
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 114 bits (275), Expect = 2e-24
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2
Query: 236 KAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
K G P L PHT+LITKSGVIQLIMKSKLPYA+ELQEWLLEEVIPQVLCTGKY PAV+
Sbjct: 86 KKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAVDNG 145
Query: 416 TNDVIAKIDDLTQKLTVANAD 478
++ + +++Q L+ D
Sbjct: 146 NGATVSMLHEISQSLSTIQRD 166
Score = 79.8 bits (188), Expect = 8e-14
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
MAQVKIG FKFGED F LRYV+ ++ V FV KDIA LKY +C++AI HV+ KYK F
Sbjct: 1 MAQVKIGVFKFGEDEFELRYVVDNDMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCVF 60
Query: 192 E 194
E
Sbjct: 61 E 61
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 113 bits (273), Expect = 4e-24
Identities = 55/81 (67%), Positives = 63/81 (77%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
MA+VKIGEFKFGEDTF LRYVL +Q VRFVAKD+A+SLKY C++AIRVHVD KYKS F
Sbjct: 1 MARVKIGEFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSLF 60
Query: 192 EHADQIQHHAPDSVAKQGDPL 254
E Q +SV K+GDPL
Sbjct: 61 EQTIQNGGPTSNSVVKRGDPL 81
Score = 110 bits (265), Expect = 4e-23
Identities = 60/104 (57%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Frame = +2
Query: 206 NPAPCSR*RGKAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 385
N P S K G P L PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT
Sbjct: 66 NGGPTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 386 GKYAPAV---EMDTNDVIAK-IDDLTQKLTVANADLAEANRSLI 505
GKY PA+ E ++ ++ K I T+ A +A+ L+
Sbjct: 126 GKYDPAIKQREEESKQLVTKLIATFTEHTNALQAVVAQKTEELV 169
>UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20 -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 179
Score = 96.7 bits (230), Expect = 6e-19
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +1
Query: 517 EMIVARRDAETAR--QDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNN 690
++I+ +DA+ A A + L+ R+ DI QDV+ KP N QL H+LAVC++ N
Sbjct: 36 DVIIQHKDAQIAELLNAILLANSQCMSLSKRLVDIVQDVVVKPQNCQLLHALAVCELSCN 95
Query: 691 EFAFLRPQKRSLGRSLKRLGF*RR-----IFSSDYVPNSMNVLNKVKEAIP 828
+FAFLR Q RSL RS+KRL + I+ S+YVPNS+N+LNK+KE +P
Sbjct: 96 KFAFLRTQLRSLKRSIKRLQRAEQHEPTIIYQSEYVPNSINILNKIKEQLP 146
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 91.9 bits (218), Expect = 2e-17
Identities = 54/102 (52%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 DLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVEMDTNDV 427
+LHP TVLI KSGVIQLIM SKLPYA+ELQEWLLEEVIPQVL TG+Y A ND
Sbjct: 104 NLHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEEVIPQVLSTGRYVCETAPSKSVNDC 163
Query: 428 IAKIDDLTQKLTVANADLAEANRSLILLPTK*LWLDATLKRL 553
++ L Q+++ L N L + D TLKRL
Sbjct: 164 QSQTVVLLQEISQTMGQLKRDNED---LKKSLVAKDETLKRL 202
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +3
Query: 9 KMAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKST 188
KM V + +FKFG+ T LRY + + V FV +DIA LKY + AI+ HV+ KYK+
Sbjct: 27 KMCTVVVRDFKFGDITMRLRYTIDQDNCVWFVGRDIAKLLKYQRTQDAIKKHVNVKYKAL 86
Query: 189 FEHA 200
+H+
Sbjct: 87 IKHS 90
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 436
+HP T++I KSGVIQLIMKSKL YA+ELQEW+ EEVIPQVLCTGKY+P + I K
Sbjct: 91 VHPQTIMINKSGVIQLIMKSKLSYAVELQEWMFEEVIPQVLCTGKYSPQAALTEEKEIVK 150
Score = 72.1 bits (169), Expect = 2e-11
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
MA VKI FKFG++ LRYV+GD V FV KDIA+ LKY N ++AI HVD KYK F
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIAF 60
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +3
Query: 12 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 191
MAQVKIG+FKFGEDTFTLRYVL D+ V+FVAKDIASSL Y A++ +VD KYKST+
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVL-DKDIVKFVAKDIASSLGYEKFSNAVKKYVDIKYKSTY 59
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 236 KAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVL 379
K G L PHT+L++ GV+QLI +SK+P A E Q+W + V+P L
Sbjct: 69 KRGDLLYLQPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHVLPACL 116
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDV 427
PA+ P+TV IT++GV LI+KSKLP A + Q+WL EEV+P++ TGKY + T+
Sbjct: 60 PANWQPNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSEAASTSTE 119
Query: 428 IAKIDDLTQKLTVANADL 481
I D + + N L
Sbjct: 120 IVNYDKKLAEAQIENLQL 137
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
P + P+T+ IT++G+ LIM+SKLP A E Q WL EEV+P++ TGKY+
Sbjct: 77 PLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYS 126
>UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophyes
honmai NPV|Rep: Baculovirus repeated ORF - Adoxophyes
honmai nucleopolyhedrovirus
Length = 113
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +3
Query: 102 VAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQHHAPDSVAKQGDPL 254
+AKD+A++LKYV+C++AIR++VD KYK F A +SVAK+GDPL
Sbjct: 1 MAKDVAAALKYVDCKQAIRINVDEKYKCKFNRGCTTHTPASNSVAKRGDPL 51
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 53.2 bits (122), Expect = 8e-06
Identities = 34/102 (33%), Positives = 52/102 (50%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDV 427
PA+ P+TV IT+ + +L KS LP A E Q+W+ EEV+P + TG Y +
Sbjct: 79 PANWQPNTVFITEPAIYKLCTKSTLPEAEEFQDWIYEEVLPTIRRTGGY--NIHDRNGTS 136
Query: 428 IAKIDDLTQKLTVANADLAEANRSLILLPTK*LWLDATLKRL 553
+A+ D +KL +L + S+ L T+ DA + L
Sbjct: 137 VAEYD---KKLADGQNELTKTQLSVANLETQVAKYDARIAEL 175
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 260 HPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 376
HPHTV + K+G++Q+I K KL A +LQ+WL EEV P++
Sbjct: 81 HPHTVSVNKAGLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascovirus
3e|Rep: Bro6 - Heliothis virescens ascovirus 3e
Length = 153
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 VANEMIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCD-VG 684
+ +I + + D +ARR+T +LANR+ADI Q V+AKPS + HSL + +
Sbjct: 57 MTGHLIQSNASLVSVSNDLVSARRDTVKLANRIADITQAVVAKPSVEECLHSLVMHSMIS 116
Query: 685 NNEFAFLRPQKRSL 726
+ + A R QKRS+
Sbjct: 117 SRDTATNRSQKRSI 130
>UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;
Salinispora|Rep: BRO domain protein domain protein -
Salinispora tropica CNB-440
Length = 284
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 266 HTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY--APAVEMDTNDVIAKI 439
H + +SG+ LI +S+ P A + W+ EV+P + TG+Y PAV D +
Sbjct: 86 HVRITNESGLYDLIFQSRKPEARAFRRWVTHEVLPAIRATGRYESVPAVPQSYADALQLA 145
Query: 440 DDLTQKLTVANADLAEA 490
D ++L A+LAEA
Sbjct: 146 ADQARQLDAQAAELAEA 162
>UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep:
BRO-B - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 635
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 251 ADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVI 430
+ LHP T I K+G+ +LI SK+P A E ++W+ +++P++ G+Y V++ N+
Sbjct: 72 SSLHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLCDKGRYDMQVDVLANNCA 131
Query: 431 AK 436
K
Sbjct: 132 QK 133
>UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep:
BRO-f - Mamestra configurata NPV-A
Length = 357
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +2
Query: 242 GRPADLHPHTVLITKSGVIQLIMKSKLP-YAIE-LQEWLLEEVIPQVLCTGKY---APAV 406
G + HPHTV + + G+ Q+I+ SKL +E ++W+ EEV+P + TG+Y A
Sbjct: 73 GITSSTHPHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKMDTAAA 132
Query: 407 EMDTNDV--IAKIDDLTQKLTVANAD 478
+ NDV +A + ++Q + D
Sbjct: 133 PTNGNDVNTVALLQTISQNIVCLKED 158
>UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA
stage|Rep: Ld-bro-c - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 528
Score = 47.6 bits (108), Expect = 4e-04
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTN-D 424
PA+ HP T+ + + GV L+ +S P A E +++ E ++P + TGK+ + N +
Sbjct: 83 PANWHPETLFVLEPGVYALMARSTKPMAKEKMKFVYETILPTIRKTGKFEMNKTSNINYE 142
Query: 425 VIAKIDDLTQKL----TVANAD--LAEANRSLI 505
KI L +K+ TVA D LAEAN L+
Sbjct: 143 TEMKIKLLEEKMEHQSTVARNDSKLAEANMKLV 175
>UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11;
Avipoxvirus|Rep: CNPV160 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 396
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 565 ENARRETAQLANRMADIAQ---DVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLG 729
E R+T +L + I + D + PS+P H L + N N F LR Q + L
Sbjct: 265 EKYDRDTLELKTELKKIEERLKDKVINPSSPDKLHRLVILQKKNDSNSFRTLRVQAKGLD 324
Query: 730 RSLKRLGF*RRIFSSDYVPNSMNVLNKVKEAI 825
R L ++ R+F + Y PN+++ N++KE +
Sbjct: 325 RELDKVKRDYRVFFNAYEPNAVSCFNRLKERL 356
>UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura
granulovirus|Rep: Bro-5 - Spodoptera litura granulovirus
Length = 256
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 391
PA+ P+TV I+++GV LIM+ KL A ++WL EEV+P++ G+
Sbjct: 75 PANWQPNTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPELRKNGR 122
>UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF2; n=1; Culex nigripalpus
NPV|Rep: CUN108 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF2 - Culex nigripalpus NPV
Length = 601
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 451
V++ + GV QLI++S+LP A ++W+ V+P + TG+Y +E++ D+
Sbjct: 241 VMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPSIRKTGRYERTMELEPKSC---GDNSR 297
Query: 452 QKLTVANADLAEANRSLILLPTK 520
+L LAE+ SLIL ++
Sbjct: 298 IELLETKLALAESRSSLILAESR 320
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +2
Query: 206 NPAPCSR*RGKAGRPADLH------PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVI 367
NP R K+ RP ++ P +I + V +L+M+SK+P A +EW++ EV+
Sbjct: 60 NPQKAVRDHCKSPRPVGVNDSFTLGPSANIIPERDVYRLVMRSKMPQAERFEEWVVSEVL 119
Query: 368 PQVLCTGKY-APAVEMD 415
P + TG Y APA D
Sbjct: 120 PSIRKTGGYTAPAQPAD 136
>UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum
granulovirus|Rep: ORF130 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 237
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 376
P++ P+TV IT++GV LI KSKL A +EWL + +IPQ+
Sbjct: 51 PSNWQPNTVFITEAGVYALINKSKLAGAEIFREWLFDTIIPQM 93
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
+I +S V +LI+KS LP A + + W++EEV+P + TG Y+ V + DL +
Sbjct: 67 VIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-NVPQSFAQALRLAADLEE 125
Query: 455 KLTVANADLAEANRSLILLPT 517
K + +AE + L T
Sbjct: 126 KNQLLEQQIAEYEPKISYLDT 146
>UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Rep:
Ld-bro-i - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 346
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-----APAVEM 412
PA+ HP T+ + + GV L+ +S P A E +++ E ++P + TGK+ + +
Sbjct: 83 PANWHPETLFVLEPGVYALLARSNKPLAKERMKFVYETILPTIRKTGKFEMSKTSDVINY 142
Query: 413 DTNDVIAKIDDLTQKLTVAN--ADLAEANRSLI 505
D K++ L +K+ + A LAE R+++
Sbjct: 143 DARMAEMKVELLEEKMKHQSTVACLAEKERAIV 175
>UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA
stage|Rep: Bro-i - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 263
Score = 44.4 bits (100), Expect = 0.004
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 376
LHP + I K+G+++L++KS++ YA E + WL+ E+ P +
Sbjct: 96 LHPSSRFINKAGLLELVLKSRMRYAAEFRFWLVNELFPSL 135
>UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 374
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAP-AVEMDTNDVIAK 436
V+I +SG+ L+++S+ P A + +W+ EV+PQ+ TG Y P ++ D++ K
Sbjct: 135 VIINESGLYALVLRSRKPEARKFAKWVTSEVLPQIRKTGAYLPKEFAVNPGDILTK 190
>UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: Phage
antirepressor protein - Streptococcus pyogenes serotype
M4 (strain MGAS10750)
Length = 244
Score = 44.4 bits (100), Expect = 0.004
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
+I +SG+ LI+ SKLP A + W+ EV+P + G Y E TN+ + L
Sbjct: 70 IINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEKKTNEEL-----LAD 124
Query: 455 KLTVANADLAEANRSL 502
+ VAN +AE +
Sbjct: 125 AILVANRIIAEREEEI 140
>UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted prophage
antirepressor - Clostridium kluyveri DSM 555
Length = 267
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT-NDVIAKIDDLTQ 454
I + + +L+ S+LP A E + W+ ++V+PQ+ TG Y P E ++ D++AK L
Sbjct: 71 IPEGDIYRLVANSELPGAQEFESWIFDKVLPQINHTGGYIPNNEDESEEDILAKA-VLIA 129
Query: 455 KLTV--ANADLAEANRSL 502
K T+ N +A+ N+ L
Sbjct: 130 KRTIERKNEIIADKNKQL 147
>UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep:
Prophage antirepressor - Clostridium beijerinckii NCIMB
8052
Length = 251
Score = 43.6 bits (98), Expect = 0.006
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +2
Query: 236 KAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
K G A + +I + + +L+ KS+LP A + + W+ +EV+P + TG YA +D
Sbjct: 64 KDGTDAIQNVEMSVIPEGDIYRLVAKSELPGAEKFEAWIFDEVLPCIRKTGMYATDELLD 123
Query: 416 TNDVIAKIDDLTQKLTVANADLAEANRSLILLPTK*LWLDATLKR----LGKIAKTRAAK 583
D++ I T+ A L N+ +L P + D + +G +AK K
Sbjct: 124 NPDLL--IAAATKLKEERKARLEAENKVKLLEPKGEFYDDVAGSKDSIEMGHVAKVLGIK 181
Query: 584 RRSWPTAWRTLRK 622
R + LR+
Sbjct: 182 RMGRNRLFSLLRE 194
>UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage
Ma-LMM01|Rep: Prophage antirepressor - Cyanophage
Ma-LMM01
Length = 270
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPA---VEMDTNDVIAKIDDL 448
I++SG+ +L++ S+ P A Q+W+++EV+P + TG+Y+ + + + + + L
Sbjct: 75 ISESGLYRLVLSSRKPQAELFQDWVVQEVLPTIRKTGRYSVSDFKIPTTYGEALLEAGRL 134
Query: 449 TQKLTVANADLAEANRSL 502
+L N L + N +L
Sbjct: 135 ALELEQTNVTLEQVNATL 152
>UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2;
Canarypox virus|Rep: CNPV169 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 332
Score = 43.2 bits (97), Expect = 0.008
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 535 RDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN--NEFAFLR 708
RD + + + E +L R+ +D + P++P H L + N F LR
Sbjct: 198 RDTNELKSELREVKTELKKLEERL----KDKVINPTSPNKLHRLVILQNKRDPNSFKTLR 253
Query: 709 PQKRSLGRSLKRLGF*RRIFSSDYVPNSMNVLNKVKEAI 825
Q L R L ++ R+F + Y PN+++ N++KE +
Sbjct: 254 LQAERLDRELDKVKRDYRVFFNAYEPNAVSCFNRLKERL 292
>UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2;
Desulfovibrio desulfuricans G20|Rep: Prophage
antirepressor-like - Desulfovibrio desulfuricans (strain
G20)
Length = 197
Score = 43.2 bits (97), Expect = 0.008
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 451
++I + G+ LI +S+ P AI Q+W+ +EV+P + G Y DT++ I I T
Sbjct: 82 LIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESI--IQKAT 139
Query: 452 QKLTVANAD 478
Q + +A D
Sbjct: 140 QIIALARED 148
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
P L T I SG LI SK P+A+++++WL +EVIP ++ G Y+
Sbjct: 168 PKTLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIPALIMDGVYS 217
>UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura
granulovirus|Rep: Bro-1 - Spodoptera litura granulovirus
Length = 471
Score = 42.3 bits (95), Expect = 0.014
Identities = 21/78 (26%), Positives = 45/78 (57%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 436
LHP++ I ++G+ +LI S +P A + ++W+ +++ ++ TGKY+ T++ A+
Sbjct: 70 LHPYSKFINQAGLFELIQSSCMPKAQQFKDWVTSKLLTRLCKTGKYSM-----TDNAPAQ 124
Query: 437 IDDLTQKLTVANADLAEA 490
I+D + A + +A
Sbjct: 125 INDAMNTIHAATNEGTQA 142
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 42.3 bits (95), Expect = 0.014
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I + + ++I KS+ A+E Q W+ EEV+PQ+ TGKY
Sbjct: 69 INEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKY 107
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I + VI+LIM+SKLP A Q+W+ EE++P + G Y
Sbjct: 78 INEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAY 116
>UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep:
Prophage antirepressor - Alkaliphilus metalliredigens
QYMF
Length = 276
Score = 42.3 bits (95), Expect = 0.014
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKID---D 445
+I +SG+ LI+ SKLP A + W+ EV+P + G Y +++ +V+ D
Sbjct: 70 IINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGVYMTPDKIE--EVLLNPDMIIG 127
Query: 446 LTQKLTVANADLAEANRSLI-LLPTK*LWLDATLKRLGKIAKTRAAK 583
L KL V +L++ + +I L K ++D LK G + T+ AK
Sbjct: 128 LATKLKV-EQELSKKQQQIIGELKPKADYMDKILKNKGLVTITQIAK 173
>UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF 2; n=1; Culex nigripalpus
NPV|Rep: CUN001 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF 2 - Culex nigripalpus NPV
Length = 593
Score = 41.9 bits (94), Expect = 0.019
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 451
V++ + GV QLI++S+LP A ++W+ V+P + TG+Y D DV + DDL
Sbjct: 244 VMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPSIRRTGRY------DVRDV-KREDDLA 296
Query: 452 QKLTVANADLAE 487
L AD AE
Sbjct: 297 --LAQLKADFAE 306
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 41.9 bits (94), Expect = 0.019
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+L+++SG+ +LIM+S P A Q+W+ +EV+P + TG +
Sbjct: 57 ILVSESGLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSF 97
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 41.9 bits (94), Expect = 0.019
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAV 406
+++++ V++LI SKLP A + + W+ EEV+P + TG Y AP+V
Sbjct: 70 ILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAAPSV 114
>UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Rep:
Gp47 - Mycobacterium phage Tweety
Length = 334
Score = 41.9 bits (94), Expect = 0.019
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 451
V +T++GV L+M S+ P + W+ EV+P + TG Y+ +DTN + L
Sbjct: 141 VAVTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYS---AVDTNIALPDRKTLA 197
Query: 452 QKLTVA--NADLAEANRSLILLP 514
Q + A A+LAEA + +P
Sbjct: 198 QWVVEAETRAELAEAKALELSVP 220
>UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata
NPV-A|Rep: BRO-a - Mamestra configurata NPV-A
Length = 161
Score = 41.5 bits (93), Expect = 0.025
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 230 RGKAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 364
R P H +TV I ++GV+ LIM S++ YA E ++W EE+
Sbjct: 20 RNMENAPKHWHSNTVFIDEAGVMSLIMNSEISYAKEFKKWFYEEL 64
>UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2;
Enterobacteriaceae|Rep: Similar to bacteriophage protein
- Photorhabdus luminescens subsp. laumondii
Length = 314
Score = 41.5 bits (93), Expect = 0.025
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
+L +S + +L+M+S LP A Q+W+ E V+P ++ TG Y+
Sbjct: 139 ILAGQSDMFRLVMRSNLPSAERFQDWVCEAVLPSIMETGSYS 180
>UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3;
Canarypox virus|Rep: CNPV227 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 359
Score = 41.1 bits (92), Expect = 0.033
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 565 ENARRETAQLANRMADIAQ---DVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLG 729
E R+T +L + I + D + PS+P H L + N F LR Q L
Sbjct: 228 EKYDRDTHELKTELKKIEERLKDKVINPSSPNKLHRLVILQNKRDPNSFKTLRLQAERLD 287
Query: 730 RSLKRLGF*RRIFSSDYVPNSMNVLNKVKEAI 825
R L ++ ++F + Y PN+++ N++KE +
Sbjct: 288 RELDKVKRDYKVFFNAYEPNAVSCFNRLKERL 319
>UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1;
Orgyia pseudotsugata MNPV|Rep: Putative uncharacterized
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 60
Score = 41.1 bits (92), Expect = 0.033
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2
Query: 725 SDRFCGRRNANSLLPTSHTARLWHSCG 645
S+RFCGR NANSLLP++HTA + G
Sbjct: 15 SERFCGRTNANSLLPSAHTASACSTAG 41
>UniRef50_Q185G9 Cluster: Putative phage-related regulatory protein;
n=1; Clostridium difficile 630|Rep: Putative
phage-related regulatory protein - Clostridium difficile
(strain 630)
Length = 121
Score = 41.1 bits (92), Expect = 0.033
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 436
+T+SGV +LI KS+ A Q+W+ +EV+P + TG Y TN+VI K
Sbjct: 74 LTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAYI------TNNVIPK 120
>UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1;
Haemophilus influenzae 22.4-21|Rep: Possible prophage
antirepressor - Haemophilus influenzae 22.4-21
Length = 210
Score = 41.1 bits (92), Expect = 0.033
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I + + ++I +S AIE Q W+ EEV+PQ+ TGKY
Sbjct: 69 INEPNLYRIIFRSNKAEAIEFQNWIFEEVLPQIRKTGKY 107
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura granulovirus
Length = 368
Score = 40.7 bits (91), Expect = 0.044
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 308 MKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
M+SKLP A E Q WL EEV+P++ +GKY
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKY 29
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 40.3 bits (90), Expect = 0.058
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 388
++++ V++LI+ SKLP A+ + W+ EEV+P + TG
Sbjct: 68 ILSEPDVLRLIVGSKLPAAVRFERWVFEEVLPTIRTTG 105
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 40.3 bits (90), Expect = 0.058
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDL 448
LIT+ V +LI+ S LP A + + W+ +EV+P + TG+Y + T ++ I DL
Sbjct: 66 LITEGDVYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQAQQNVIT-ELTGTIGDL 122
>UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8;
Pasteurellaceae|Rep: Uncharacterized protein HI1418 -
Haemophilus influenzae
Length = 201
Score = 40.3 bits (90), Expect = 0.058
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I + + +LI+KS+ P A + W+ EEV+PQ+ TGKY
Sbjct: 86 INEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKY 124
>UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovirus
3e|Rep: Bro20 - Heliothis virescens ascovirus 3e
Length = 191
Score = 39.9 bits (89), Expect = 0.076
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 257 LHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+ T I ++G+ +LIM S++P A + Q W+ +++P++ G+Y
Sbjct: 90 IRARTKFINRAGMFELIMSSRMPRARKFQRWVFSDLLPKLCQNGQY 135
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 39.9 bits (89), Expect = 0.076
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAK 436
I ++G+ QLI KSKL A Q+W+ EV+P V G Y TND I K
Sbjct: 69 INEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYM------TNDTIEK 115
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 39.9 bits (89), Expect = 0.076
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
++I++ G+ +LIM+S+ P A E Q W+ EV+P + G Y +D
Sbjct: 69 LIISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQQTLD 116
>UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium
botulinum A str. ATCC 3502|Rep: BRO family protein -
Clostridium botulinum A str. ATCC 3502
Length = 266
Score = 39.9 bits (89), Expect = 0.076
Identities = 18/81 (22%), Positives = 41/81 (50%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQK 457
I + + +LI S+LP A + + W+ +E++P + TG Y + ++ N + +D+ ++
Sbjct: 71 IDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFINTYLPYLDEQSKM 130
Query: 458 LTVANADLAEANRSLILLPTK 520
+ ++ +I L K
Sbjct: 131 VFRNTLEIVRKQNEIIALKEK 151
>UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides 2.4.1|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 151
Score = 39.5 bits (88), Expect = 0.10
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+LI++SG+ +L+M+ P A + Q+W+ EV+P + TG Y
Sbjct: 63 MLISESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKTGTY 103
>UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein;
n=3; root|Rep: Uncharacterized phage-encoded protein -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 267
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+I++ G+ QL +SKLP A Q+W+ EEV+P + G Y
Sbjct: 68 VISEPGIYQLAGQSKLPTAEPFQDWIYEEVLPSIRKHGAY 107
>UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1;
Roseovarius sp. 217|Rep: Hypothetical BRO family protein
- Roseovarius sp. 217
Length = 163
Score = 39.5 bits (88), Expect = 0.10
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 233 GKAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEM 412
G+ G+P V++T+SG+ +L+M+S P A Q+W+ V+P + G Y
Sbjct: 94 GRGGKPM------VIVTESGLYKLVMRSDKPEAKAFQDWVTGTVLPSIRKDGGYIMGEGD 147
Query: 413 DTNDVI 430
D DV+
Sbjct: 148 DRPDVL 153
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 39.5 bits (88), Expect = 0.10
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+I + + +LIM+SKLP A +EW++ EV+P + TG Y
Sbjct: 68 IIPERDLYRLIMRSKLPAAERFEEWVVAEVLPAIRKTGFY 107
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 39.5 bits (88), Expect = 0.10
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD---TN-----DVIA 433
I + + +LI+KSKLP A + + W+ EEV+P + G Y ++ TN ++
Sbjct: 76 INEPNLYRLIVKSKLPQAEQFETWVFEEVLPSIRKHGAYMTDQVLEQAVTNPDFAIGLLT 135
Query: 434 KIDDLTQKLTVANADLAEANRSLILLPTK*LWLDATLKRLGKIAKTRA 577
K+ + +KL A + + + L+ + D +LK + ++AK A
Sbjct: 136 KLKEEKEKLAAAQQQIVQ-QQPLVTFAEACMQSDKSLK-VSEVAKLAA 181
>UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22;
Gammaproteobacteria|Rep: Phage-related protein - Xylella
fastidiosa
Length = 530
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIA 433
T +I++ +++LI+ SKLP A + W+ EE++P + TG PA++ T+ A
Sbjct: 227 TRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTGN-RPALDHSTHSANA 280
Score = 34.7 bits (76), Expect = 2.9
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA-----PAVEMDTNDVIAKI 439
I +SG+ LIM S P A + W+ EV+P + TG Y+ P + T D IA +
Sbjct: 348 INESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGPTQDRIAAL 406
>UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio
vulnificus|Rep: Prophage antirepressor - Vibrio
vulnificus
Length = 251
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQK 457
+T+ GV ++ M++K A + Q W+L+EV+P + G Y P E++ +D + ++ D K
Sbjct: 84 VTEPGVYRVAMQAKSSGAKKFQNWVLKEVMPSIRRFGIYPPP-EVNDDDFLLQVADQQAK 142
>UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4;
root|Rep: Lj965 prophage antirepressor - Lactobacillus
johnsonii
Length = 278
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
T++ +SG+ LI+ SKLP A + + W+ EV+P + G Y
Sbjct: 69 TIITNESGMYSLILSSKLPSAKKFKRWVTSEVLPAIREDGAY 110
>UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 153
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
LI +SG+ L++ SKLP A + + W+ EV+P + G Y
Sbjct: 68 LINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRKHGAY 107
>UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 248
Score = 39.1 bits (87), Expect = 0.13
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDL 448
T ++ ++G+ LI+ S+ A E + W+ EVIPQ+ TG YA ++ ++A
Sbjct: 67 TYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQIRKTGIYA----LEPKQLLAVAIIE 122
Query: 449 TQKLTVANADLAEANRSLILLPTK*LWLDATLKRLGKIAKTRAAK 583
QK+ + E +R + L K + DA I RAAK
Sbjct: 123 AQKI------IEEQDRKIKELQPKAEFFDAVAGSKDAIDMNRAAK 161
>UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;
n=1; Actinobacillus pleuropneumoniae serovar 1 str.
4074|Rep: COG3617: Prophage antirepressor -
Actinobacillus pleuropneumoniae serovar 1 str. 4074
Length = 215
Score = 38.7 bits (86), Expect = 0.18
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
I + + ++I +S AI+ Q W+ EEV+PQ+ TG+Y+
Sbjct: 15 INEPNLYRIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQYS 54
>UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1;
Aedes taeniorhynchus iridescent virus|Rep: Putative
uncharacterized protein - Aedes taeniorhynchus
iridescent virus
Length = 406
Score = 38.7 bits (86), Expect = 0.18
Identities = 24/94 (25%), Positives = 49/94 (52%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLT 451
+ I + G+ LIM S P+A E Q+ + E+++P + G Y +EM ++
Sbjct: 100 IYINEPGLYALIMHSNAPFAEEFQDLVYEQILPSIRKYGSY--QLEM-------QLTQAM 150
Query: 452 QKLTVANADLAEANRSLILLPTK*LWLDATLKRL 553
++L++ D+ EA+ + I K + +D ++R+
Sbjct: 151 EQLSIKERDVQEAHEARIKAERKAVRVDKFMRRI 184
>UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium efficiens|Rep: Putative uncharacterized
protein - Corynebacterium efficiens
Length = 262
Score = 38.7 bits (86), Expect = 0.18
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVE---MDTNDVIAKI 439
+IT+SG+ I++S+ P A E + W+ EV+P + G Y P +E D + +I
Sbjct: 65 VITESGLYSCILRSRKPEAKEFKRWVTREVLPSIRRHGGYLTDPKIEEILTDPDTIIKLA 124
Query: 440 DDLTQK 457
DL Q+
Sbjct: 125 TDLKQE 130
>UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3;
Corynebacterium|Rep: Putative anti-repressor protein -
Corynebacterium diphtheriae
Length = 272
Score = 38.7 bits (86), Expect = 0.18
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD 415
++ +SG+ +L+ +S++P A E + W+ EV+P++ G YA ++
Sbjct: 67 VVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHGMYATTATVE 113
>UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2;
Neisseria gonorrhoeae FA 1090|Rep: Putative
uncharacterized protein - Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090)
Length = 332
Score = 38.7 bits (86), Expect = 0.18
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+ I + + ++I +S+ A++ Q+W+ EEVIPQ+ TG Y
Sbjct: 117 LFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGY 157
>UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococcus
phage SM1
Length = 239
Score = 38.7 bits (86), Expect = 0.18
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
++I +SG+ LI+ SKLP A E + W+ EV+P + G +
Sbjct: 65 LIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGF 105
>UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV194 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 409
Score = 38.3 bits (85), Expect = 0.23
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 266 HTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDT 418
+T+ I++SG+ LI+ SK A ++W+ EV+P + G+Y E++T
Sbjct: 73 NTIYISESGLYSLILSSKKSEAKIFKKWITNEVLPNIRKHGEYKIKKELET 123
>UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-117 - Ectocarpus siliculosus virus 1
Length = 524
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
TV +T+ GV +LIM+S+ P A Q+W+ EV+ + GKY
Sbjct: 68 TVFVTEKGVYKLIMRSRKPVAKPFQDWVF-EVLKTIRKRGKY 108
>UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4;
root|Rep: Phage associated-antirepressor - Geobacillus
kaustophilus
Length = 246
Score = 38.3 bits (85), Expect = 0.23
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDL 448
T ++ + G+ LI+ S+ A + + W+ EVIP + TG Y ++ + D+
Sbjct: 67 TFIVNEPGLYTLILGSRKSEAKQFKRWVTHEVIPTIRKTGGYVANDDLFVETYLKHADEQ 126
Query: 449 TQKLTVANAD-LAEANRSLILLPTK*LWLDATLKR 550
T+ L A + + + N + + K + DA + R
Sbjct: 127 TKLLFRATLETVRKQNEQIAAMQPKADYFDALVDR 161
>UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein;
n=3; Clostridium perfringens|Rep: BRO family, N-terminal
domain protein - Clostridium perfringens (strain SM101 /
Type A)
Length = 191
Score = 38.3 bits (85), Expect = 0.23
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 263 PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKID 442
P V+ + G+ I SKLP I ++WL EV+P++ G Y+ E +++ K
Sbjct: 85 PKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGTYSINKESYKDNLKYK-- 142
Query: 443 DLTQKLTVANADLAEANRSLILL 511
+ L++ D R+L LL
Sbjct: 143 --NENLSLYTQDKLNEGRNLSLL 163
>UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 250
Score = 38.3 bits (85), Expect = 0.23
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA---PAVEMDTNDVIAKI 439
+I + +++LI S+LP A + W EEV+P V+ TG Y PA+ D + ++
Sbjct: 65 VIGEPDLLRLITGSRLPQAERFERWAFEEVLPTVIRTGSYTAPPPALPQSYADALREL 122
Score = 35.1 bits (77), Expect = 2.2
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 42 FGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDG 173
FG D +R VL + P RFVA+D+AS+L Y + AI+ H G
Sbjct: 4 FGFDGHHVRVVLVEGLP-RFVARDVASALGYTDPTSAIKQHCRG 46
>UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: BRO
family protein - Brucella suis
Length = 140
Score = 37.9 bits (84), Expect = 0.31
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 263 PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 409
P + +++SG+ +LIM+S+ P A + Q W+ + V+P + G Y E
Sbjct: 73 PSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEE 121
>UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 309
Score = 37.9 bits (84), Expect = 0.31
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I + V +LI++SKLP A + + W+ +EVIP + TG Y
Sbjct: 125 IPEGDVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGY 163
>UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2;
root|Rep: Putative uncharacterized protein -
Enterobacteria phage phiP27
Length = 274
Score = 37.9 bits (84), Expect = 0.31
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+L+ +SG+ LI+KS+ A + W+ EVIP + TG Y
Sbjct: 72 LLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNY 112
>UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Rep:
Gp77 - Mycobacterium phage Che12
Length = 280
Score = 37.9 bits (84), Expect = 0.31
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 248 PADLHPHT--VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 388
P + PH ++I ++G+ +LIM+S +P A Q+W+ V+P + TG
Sbjct: 75 PGQVVPHRDMLVINEAGLYRLIMRSNVPAAAPFQDWVTAVVLPTIRKTG 123
>UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum
granulovirus|Rep: ORF62 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 211
Score = 37.5 bits (83), Expect = 0.41
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 212 APCSR*RGKAGRPADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 361
+PCS G +P +T+ I K G+I LI S LP A E + W L +
Sbjct: 78 SPCSP--GPNNQPIHWQSNTLFINKDGIISLINNSTLPVAHEFKRWFLAQ 125
>UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2;
Leifsonia xyli subsp. xyli|Rep: Prophage antirepressor
protein - Leifsonia xyli subsp. xyli
Length = 260
Score = 37.5 bits (83), Expect = 0.41
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
L+ + G+ LI++S+ A + W+ EV+PQ+ TG Y+ V D + + +
Sbjct: 69 LVNEPGLYSLILRSRKTEARAFKRWVTHEVLPQIRRTGSYS-VVPADDVALPQNYVEALE 127
Query: 455 KLTV---ANADLAEANRSLILLPTK*LWLDATLKRLGKIAKTRAAK 583
L V AN L N L+ P W DA +G + AAK
Sbjct: 128 ALLVREKANQQLIVENAGLV--PRAGAW-DAIASAVGDYSVGDAAK 170
>UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans
SPH-1|Rep: BRO-like - Delftia acidovorans SPH-1
Length = 270
Score = 37.5 bits (83), Expect = 0.41
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-APAVEMDTNDVIAKIDDL 448
++I +SG+ I+KS+ A ++W+ EV+P + TG Y PA + + ++D
Sbjct: 67 IVINESGLYSAILKSERQEAKRFKKWVTSEVLPSIRRTGSYTGPAAQQMAAPLRDQVDAG 126
Query: 449 TQKLTVANADLAEANRSLI 505
L A DL A +++
Sbjct: 127 ILLLRAAAEDLKFAPSAVL 145
>UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep:
Bro-a - Helicoverpa armigera NPV
Length = 244
Score = 36.7 bits (81), Expect = 0.71
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWL 352
P ++ P+T I ++GV +LIM S++ YA + + WL
Sbjct: 76 PRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWL 110
>UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas
aromatica RCB|Rep: BRO family protein - Dechloromonas
aromatica (strain RCB)
Length = 58
Score = 36.7 bits (81), Expect = 0.71
Identities = 12/40 (30%), Positives = 28/40 (70%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
L+ +SG+ +++++S+ A + Q+W+ +EV+P + TG +
Sbjct: 12 LLAESGLYKMVLRSRTQQAQKFQDWVTKEVLPSIRKTGSF 51
>UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium
sordellii|Rep: Antirepressor protein - Clostridium
sordellii
Length = 187
Score = 36.7 bits (81), Expect = 0.71
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMD-TNDVIAKIDDLTQ 454
I + + +LI+KSKL + + W+ EEV+P + G+Y +D D + LT+
Sbjct: 77 IDEGNLYRLILKSKLKKVRKFEMWVFEEVLPTIRKHGEYINEDIIDEVLDDPILLRKLTE 136
Query: 455 KLTVANADLAEANRSLILL 511
+L+ + EA R + LL
Sbjct: 137 RLSDEKSKRYEAERKVNLL 155
>UniRef50_A4LXX6 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 132
Score = 36.7 bits (81), Expect = 0.71
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +1
Query: 424 CYCQN*RSDAKIDGGQRRFGGSQPIAHFVANEMI--VARRDAETARQDCENARRETAQLA 597
C C +DGG++R G + H + E++ + DA E ARRET L
Sbjct: 35 CSCTECEHPVAVDGGEQRCGVRGCLEHLLDRELLARIEILDARLENLRQEAARRETPTLP 94
Query: 598 NRMADIAQDVIAKPSNPQLCH 660
Q V + P LCH
Sbjct: 95 CPECGEVQTVTIYNNGPYLCH 115
>UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 254
Score = 36.7 bits (81), Expect = 0.71
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
I + + +LI+KSKLP A + W+ +EV+P + G YA
Sbjct: 68 IPEGDLYRLIVKSKLPKAERFERWVFDEVLPSIRKHGIYA 107
>UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites
nucleopolyhedrovirus|Rep: BRO-C - Chrysodeixis chalcites
nucleopolyhedrovirus
Length = 268
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
T+ + +GV++LI S++ AI+L++WL V+ ++ G+Y
Sbjct: 85 TIFVNLAGVLELIKGSQIQKAIDLRQWLASTVLIKLCTDGQY 126
>UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticarsia
gemmatalis nucleopolyhedrovirus|Rep: Baculovirus
repeated ORF - Anticarsia gemmatalis nuclear
polyhedrosis virus (AgMNPV)
Length = 60
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 150 AIRVHVDGKYKSTF-EHADQIQHHAPDSVAKQGDPL 254
A+ HVD KYK T+ E ++ A D+VAKQ DPL
Sbjct: 8 AVNQHVDDKYKFTYGEQTPGVRAPAADTVAKQRDPL 43
>UniRef50_Q629R8 Cluster: Polysaccharide deacetylase family protein;
n=20; Burkholderiaceae|Rep: Polysaccharide deacetylase
family protein - Burkholderia mallei (Pseudomonas
mallei)
Length = 395
Score = 35.9 bits (79), Expect = 1.2
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -2
Query: 713 CGRRNANSLLPTSHTARLWHSCGLLGLAITSCAMSAMRLASCAVSRRAFSQSCRAVSASR 534
CG + TS T +CG G T C AMR+ A R A + C A SR
Sbjct: 15 CGTCGTSGTCGTSGTCGTCGTCGTCGTCGT-CGTCAMRVTGAAARRPATAMRCAAKRTSR 73
Query: 533 RA 528
RA
Sbjct: 74 RA 75
>UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 261
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 610 PPCGWPAAPFRGARFRNLAEPFQRRVEPQSFR 515
PPCGW +PFRG +++A RR P + R
Sbjct: 42 PPCGWSPSPFRGGSQKDMAMTDARRFAPATAR 73
>UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 220
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+ + + ++I +S P A + Q+W+ EV+P + TGKY
Sbjct: 23 VNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKY 61
>UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 265
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
I + + +LI+KS+LP A ++W+ +EV+P + G YA
Sbjct: 71 IPEGDLFRLIVKSQLPAAERFEKWVFDEVLPTIRKYGVYA 110
>UniRef50_A7IY79 Cluster: Putative antirepressor; n=1;
Corynebacterium phage P1201|Rep: Putative antirepressor
- Corynebacterium phage P1201
Length = 307
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
+++SG+ +I+ S+ P A E + W+ EVIP + G Y + +++ +V+ D + Q
Sbjct: 113 VSESGLYDVILDSRKPEAKEFRRWITSEVIPSIRKHGAYLTSEKIE--EVLLNPDAIIQ 169
>UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1;
Mamestra configurata NPV-B|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 134
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 361
P P+T I K G+I LI S LP A E ++W L +
Sbjct: 11 PIPWRPNTWFINKDGIISLINNSTLPVAHEFKKWFLAQ 48
>UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 150
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 385
LI++SG+ +LI +S P A QEW+ +V+P V T
Sbjct: 95 LISESGLYKLITRSDKPEAKPFQEWVTRDVLPSVRLT 131
>UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium
104|Rep: Gp54 protein - Mycobacterium avium (strain 104)
Length = 263
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
++ +SG+ LI +S A +++ W+ EV+P + TG Y V + ++++ + +TQ
Sbjct: 75 VVNESGMYALIFQSNKDRARDVRRWVTSEVLPSIRKTGSYGAPV-LTEDEIVHRALTITQ 133
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 35.5 bits (78), Expect = 1.6
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKL--PYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTN 421
P ++ V K G+ + SKL +AI L + + + Q++ P + D N
Sbjct: 29 PGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQIMEEHGATPELPEDLN 88
Query: 422 DVIAKIDDLTQKLTVANADLAEANRSLILLPTK*LWLDATLKRLGKIAK 568
+++ K L + L D RSL L+ K LD KR+G+I K
Sbjct: 89 NIVQKAVGLQRHLRANKGDRRNV-RSLELIEAKVHRLDVYYKRIGRIPK 136
>UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent virus
6|Rep: 201R - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 419
Score = 35.1 bits (77), Expect = 2.2
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 269 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
++ I + G+ LIM S+ P+A + Q+ + E+++P + G Y+
Sbjct: 97 SIYINEPGLYNLIMSSEAPFAEQFQDMVYEKILPSIRKYGSYS 139
>UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein;
n=1; Burkholderia pseudomallei 1710b|Rep: BRO family,
N-terminal domain protein - Burkholderia pseudomallei
(strain 1710b)
Length = 239
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +2
Query: 275 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVEMDTNDVIAKIDDLTQ 454
++++SG+ LIM+S+ P A ++W+ V+P + G Y E + + + + +
Sbjct: 65 VVSESGLYALIMRSRKPQARAFRKWVTSVVLPAIRKDGSYVMGEEKVATGEMDEAELMAR 124
Query: 455 KLTVAN 472
+ AN
Sbjct: 125 AMIAAN 130
>UniRef50_A5DCD7 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 373
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 442 RSDAKIDGGQRRFGGSQPIAHFVANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 621
R D Q + + V E ARR+AE AR++ E ARRE + A R A+ A+
Sbjct: 136 RDDRLRQAEQAKLNARRESEERVRREAERARREAERARREAERARREAEERARREAERAR 195
>UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit
beta''; n=1; Cyanidium caldarium|Rep: DNA-directed RNA
polymerase subunit beta'' - Cyanidium caldarium
Length = 1269
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 517 EMIVARRDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEF 696
E +++ A D ++ L R+ D+AQD+I + + + + + ++ NNE
Sbjct: 183 EYLISSYGARKGLVDTSLRTADSGYLTRRLVDVAQDIIVREIDCKTNNGITFSNIQNNEK 242
Query: 697 AFLRPQKRSLGRSL 738
+ KR +GR L
Sbjct: 243 IIIPLYKRLIGRIL 256
>UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascovirus
3e|Rep: Bro9 - Heliothis virescens ascovirus 3e
Length = 521
Score = 34.7 bits (76), Expect = 2.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
I ++G+ +LI S++P A+E + W+ ++P++ G Y
Sbjct: 82 INRAGLFELIQASRMPKALEFKNWINSVLLPKLCDDGSY 120
>UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella
fastidiosa|Rep: BRO, N-terminal - Xylella fastidiosa
Ann-1
Length = 264
Score = 34.3 bits (75), Expect = 3.8
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA--PAVEMDTNDVIAKIDDLT 451
+ + G+ + +S P A+ Q+WL EV+P + TG+Y P +E D +K
Sbjct: 72 LAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGEYTVNPDLEYDQMRSYSKDRKQM 131
Query: 452 QKLTVANA 475
++L A++
Sbjct: 132 EELNTAHS 139
>UniRef50_Q9YVP7 Cluster: ORF MSV195 ALI motif gene family protein;
n=1; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV195 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 87
Score = 33.9 bits (74), Expect = 5.0
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 63 LRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEH 197
+ V+ + V F AK+ A LKY N +AIR HV K++ +F++
Sbjct: 13 IHIVIDNNNKVLFKAKNCAEILKYTNPLKAIRDHVRQKHQISFKN 57
>UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;
Brucella|Rep: PHAGE-RELATED DNA BINDING PROTEIN -
Brucella melitensis
Length = 191
Score = 33.9 bits (74), Expect = 5.0
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 272 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYAPAVE 409
V+++++ + +LIM+S P A + Q W+ V+P +L G Y E
Sbjct: 90 VIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLYVRGEE 135
>UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage
protein; n=2; Actinomycetales|Rep: Putative DNA-binding
bacteriophage protein - Corynebacterium diphtheriae
Length = 264
Score = 33.9 bits (74), Expect = 5.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 397
IT+ + +LI+ SKL A + + W+ +EV+P + G YA
Sbjct: 70 ITEGDLYRLIISSKLSAAQKFEAWVFDEVLPTIRRHGVYA 109
>UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 sensu
lato|Rep: ORF018 - Staphylococcus phage 92
Length = 245
Score = 33.9 bits (74), Expect = 5.0
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 36 FKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFE 194
F F E +R V + +P FV KDIA L Y + AIR HVD + K T +
Sbjct: 7 FNFKE--LPVRTVEIENEPY-FVGKDIAEILGYARADNAIRNHVDSEDKLTHQ 56
>UniRef50_A1YJ07 Cluster: 38.7 kDa protein; n=6;
Nucleopolyhedrovirus|Rep: 38.7 kDa protein - Spodoptera
frugiperda nuclear polyhedrosis virus (SfNPV)
Length = 384
Score = 33.5 bits (73), Expect = 6.6
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 24 KIGEFKFGED-TFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHA 200
K KF + +FT+ Y+ DE V A ++ Y + +RAI VD KYK T
Sbjct: 57 KSKRLKFDDQFSFTINYLFNDE--VWIAGAKFAEAMGYPDPQRAIDKLVDDKYKRTINEL 114
Query: 201 DQIQHH 218
HH
Sbjct: 115 VFNNHH 120
>UniRef50_A6FZT3 Cluster: Sensor protein; n=1; Plesiocystis pacifica
SIR-1|Rep: Sensor protein - Plesiocystis pacifica SIR-1
Length = 602
Score = 33.5 bits (73), Expect = 6.6
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 451 AKIDGGQRRFGGSQPIAHFVANEMIVARRDAETARQDCENARRETAQLANRMADIAQDVI 630
A ++ G RFGG++ ANE + ++ A A D E + Q NR D+ Q+
Sbjct: 137 ADLEPGGGRFGGAEGPMLAAANEPVQVQQRANEALADLEIQQAIEQQAQNRRNDVVQNQQ 196
Query: 631 AK--PSNPQLCHSLAVCDVGN 687
AK P QL + L +GN
Sbjct: 197 AKFDPDIAQLGNFLNGDALGN 217
>UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep:
Anti-repressor - Bacteriophage phi-11
Length = 274
Score = 33.5 bits (73), Expect = 6.6
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 36 FKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFE 194
F F E +R V + +P FV KDIA L Y + AIR HVD + K T +
Sbjct: 18 FNFKE--LPVRTVEIENEPY-FVGKDIAEILGYARSDNAIRNHVDSEDKLTHQ 67
>UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-f - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 245
Score = 33.1 bits (72), Expect = 8.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 248 PADLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 391
P + HP+ L+ + GV L+M+S A +WL+ ++P++ T +
Sbjct: 84 PLNWHPNMWLLHEVGVYALVMRSNTTVARVFVQWLIGAILPELRKTDR 131
>UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 255
Score = 33.1 bits (72), Expect = 8.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 278 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 394
+ +SG+ LI++S+ P A ++W+ EV+P + G Y
Sbjct: 107 VNESGLYTLILQSRKPEAKPFRKWVTSEVLPSIRKKGYY 145
>UniRef50_Q65943 Cluster: E1B protein, large T-antigen; n=3; Canine
adenovirus|Rep: E1B protein, large T-antigen - Canine
adenovirus 1 (strain CLL) (CAdV-1)
Length = 444
Score = 33.1 bits (72), Expect = 8.7
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 183 ICTCRRRG-HVLPVHNLHILNCWRCPWP 103
+CTC G HV+P+ N+H + PWP
Sbjct: 306 LCTCEGNGSHVVPLGNIHFASNREAPWP 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,262,841
Number of Sequences: 1657284
Number of extensions: 18574079
Number of successful extensions: 56138
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 53592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56080
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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