Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120257.Seq
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    28   0.31 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.2  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.0  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   6.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.6  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +1

Query: 535  RDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQ 714
            RDAE+  + CE A+R TA L     D  +  +A   N Q    +A  +    E    R  
Sbjct: 988  RDAESWSRICEAAKRITASLQQAWDD-ERAALAAHGNEQHFEEVADLEARRAEIRRARND 1046

Query: 715  KRSLGRSLKR 744
            +R+  R   R
Sbjct: 1047 RRNASRRAAR 1056


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 481  GGSQPIAHFVANEMIVARRDAETARQDCENARRETAQL 594
            GG  P+        ++  RDA++  + CE A+R TAQL
Sbjct: 1035 GGPDPVCPDTLQRHLL--RDADSWSRICEGAKRITAQL 1070


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +2

Query: 458 LTVANADLAEANRSLILLPTK*LWLDATLKRLGKIAKTRAAKRRSWPTAWRTLR 619
           +T   AD++ A RSL+  P+K   ++ +  R   +A+ +A   R +  A RTL+
Sbjct: 277 ITRVQADISLAKRSLMNNPSKRAIMERSNSRSSCLAEVQAEIERIFELA-RTLQ 329


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 702 SAPAKTIAGPQPETIGVLTTYL*QRLRAQLHERAKQSKGSHT 827
           +A   T  GP   T+  LT    +   A LH+      G HT
Sbjct: 377 AARTATDGGPDDRTLPELTQVRDRHAAALLHDSGITENGDHT 418


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 592 LANRMADIAQDVIAKPSNPQ 651
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,725
Number of Sequences: 2352
Number of extensions: 19925
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)