BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120257.Seq (828 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT012325-1|AAS77450.1| 348|Drosophila melanogaster AT21926p pro... 34 0.21 BT003779-1|AAO41460.1| 335|Drosophila melanogaster RE05066p pro... 34 0.21 AY060424-1|AAL25463.1| 335|Drosophila melanogaster LD39308p pro... 34 0.21 AF078907-1|AAD21873.1| 335|Drosophila melanogaster PINCH protein. 34 0.21 AE014297-751|AAF54235.1| 335|Drosophila melanogaster CG7954-PA,... 34 0.21 AE014297-750|AAN14316.1| 348|Drosophila melanogaster CG7954-PC,... 34 0.21 AE014297-749|AAN14315.1| 345|Drosophila melanogaster CG7954-PB,... 34 0.21 AE014134-3561|AAN11140.1| 600|Drosophila melanogaster CG31601-P... 30 4.4 >BT012325-1|AAS77450.1| 348|Drosophila melanogaster AT21926p protein. Length = 348 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 244 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 303 >BT003779-1|AAO41460.1| 335|Drosophila melanogaster RE05066p protein. Length = 335 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 231 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 290 >AY060424-1|AAL25463.1| 335|Drosophila melanogaster LD39308p protein. Length = 335 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 231 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 290 >AF078907-1|AAD21873.1| 335|Drosophila melanogaster PINCH protein. Length = 335 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 231 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 290 >AE014297-751|AAF54235.1| 335|Drosophila melanogaster CG7954-PA, isoform A protein. Length = 335 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 231 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 290 >AE014297-750|AAN14316.1| 348|Drosophila melanogaster CG7954-PC, isoform C protein. Length = 348 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 244 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 303 >AE014297-749|AAN14315.1| 345|Drosophila melanogaster CG7954-PB, isoform B protein. Length = 345 Score = 34.3 bits (75), Expect = 0.21 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -3 Query: 355 QKPFL*FYGVRQFGLHYQLNHAR--FGNEHCVWVQISGSPCFATLSGAWCWIWSACSNVD 182 +KPFL + GL Y H FGN V Q+ G F L+ AWC ACS D Sbjct: 241 EKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCD 300 >AE014134-3561|AAN11140.1| 600|Drosophila melanogaster CG31601-PA protein. Length = 600 Score = 29.9 bits (64), Expect = 4.4 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 225 LEHGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRCPWPQ 100 LE G FG + S T ++ + +P+ HI NC C W Q Sbjct: 238 LEDGELFGEDNEVSSNTIKKEDNRMPICRYHIRNC--CIWGQ 277 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 39,206,543 Number of Sequences: 53049 Number of extensions: 907395 Number of successful extensions: 2686 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2527 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2679 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 3921660132 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -