Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120254.Seq
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 428 IPVGVWYGRRCQNISVQTRR 369
           +P+GV Y  +C+ + +Q +R
Sbjct: 55  VPIGVLYCMKCECVPLQKKR 74


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 46  KMVFDVYYNGYYVEKKFSKEFLIH 117
           K + D YY G   E      +LIH
Sbjct: 349 KKIRDFYYGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 46  KMVFDVYYNGYYVEKKFSKEFLIH 117
           K + D YY G   E      +LIH
Sbjct: 351 KKIRDFYYGGPNSENNLDNFYLIH 374


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 13/55 (23%), Positives = 18/55 (32%)
 Frame = +2

Query: 194 PTDRCCSATADTIGPMAQSLFSCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAAP 358
           P     +A+A    P  ++ + C   I  H Q N   D        P     A P
Sbjct: 44  PASVASNASAPLHIPAKRAAYDCEGVIRHHGQWNYSPDNHFEQYPNPTYYNLADP 98


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/58 (17%), Positives = 23/58 (39%)
 Frame = +3

Query: 174 ARFKQACLQTGVAVQRQILLARWHKVCSHVYNRSIRTHSTTVKRTDSSHRLKSQVVDK 347
           ARF   C++     +  I    +  +C     +S+R         D  H++  ++ ++
Sbjct: 434 ARFFTDCIKNREGFEMVIAEPEYTNICFWYVPKSLRGRKDEADYKDKLHKVAPRIKER 491


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/40 (22%), Positives = 23/40 (57%)
 Frame = +3

Query: 225 ILLARWHKVCSHVYNRSIRTHSTTVKRTDSSHRLKSQVVD 344
           ++L R+ ++   + +   R H   V+RT++  ++ +Q V+
Sbjct: 173 MILMRYKELNRVILDNMSRNHLFLVRRTETLAQILNQTVN 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,387
Number of Sequences: 336
Number of extensions: 2384
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)