Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120253.Seq
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p pro...    30   2.9  
AE014298-1023|AAN09205.1|  965|Drosophila melanogaster CG9650-PC...    30   2.9  
AE014298-1022|AAN09204.1|  979|Drosophila melanogaster CG9650-PB...    30   2.9  
AE014298-1021|AAF46246.3|  807|Drosophila melanogaster CG9650-PA...    30   2.9  
AY069504-1|AAL39649.1|  861|Drosophila melanogaster LD22651p pro...    29   5.1  
AE014134-1340|AAF52557.1|  861|Drosophila melanogaster CG7154-PA...    29   5.1  
AY565195-1|AAS74205.1|  324|Drosophila melanogaster 5-HT1A protein.    29   6.7  

>BT023782-1|AAZ41791.1|  779|Drosophila melanogaster LD11946p
           protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +2

Query: 218 TPDTIGPMAQSLFSCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDGYVLA 397
           TP  +G    SL    QQ+  +    SQ  RQLA    PG+  T   S  SPR       
Sbjct: 159 TPGLVGGAGGSLKLEPQQMDFY----SQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHF 214

Query: 398 SSPIPHTDWNEELKLYAQSH 457
           +SP P     ++L    + H
Sbjct: 215 ASPSPSQQQQQQLATIPRPH 234


>AE014298-1023|AAN09205.1|  965|Drosophila melanogaster CG9650-PC,
           isoform C protein.
          Length = 965

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +2

Query: 218 TPDTIGPMAQSLFSCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDGYVLA 397
           TP  +G    SL    QQ+  +    SQ  RQLA    PG+  T   S  SPR       
Sbjct: 345 TPGLVGGAGGSLKLEPQQMDFY----SQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHF 400

Query: 398 SSPIPHTDWNEELKLYAQSH 457
           +SP P     ++L    + H
Sbjct: 401 ASPSPSQQQQQQLATIPRPH 420


>AE014298-1022|AAN09204.1|  979|Drosophila melanogaster CG9650-PB,
           isoform B protein.
          Length = 979

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +2

Query: 218 TPDTIGPMAQSLFSCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDGYVLA 397
           TP  +G    SL    QQ+  +    SQ  RQLA    PG+  T   S  SPR       
Sbjct: 359 TPGLVGGAGGSLKLEPQQMDFY----SQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHF 414

Query: 398 SSPIPHTDWNEELKLYAQSH 457
           +SP P     ++L    + H
Sbjct: 415 ASPSPSQQQQQQLATIPRPH 434


>AE014298-1021|AAF46246.3|  807|Drosophila melanogaster CG9650-PA,
           isoform A protein.
          Length = 807

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +2

Query: 218 TPDTIGPMAQSLFSCVQQIYSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDGYVLA 397
           TP  +G    SL    QQ+  +    SQ  RQLA    PG+  T   S  SPR       
Sbjct: 187 TPGLVGGAGGSLKLEPQQMDFY----SQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHF 242

Query: 398 SSPIPHTDWNEELKLYAQSH 457
           +SP P     ++L    + H
Sbjct: 243 ASPSPSQQQQQQLATIPRPH 262


>AY069504-1|AAL39649.1|  861|Drosophila melanogaster LD22651p
           protein.
          Length = 861

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 275 YSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDG 385
           YS  Q  +Q  R L  I K GS  T   S +SP +DG
Sbjct: 21  YSQHQDPAQLQRGLKLILKVGSNATPEYSANSPMVDG 57


>AE014134-1340|AAF52557.1|  861|Drosophila melanogaster CG7154-PA
           protein.
          Length = 861

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 275 YSHAQHNSQTDRQLASIKKPGSRQTAARSLDSPRLDG 385
           YS  Q  +Q  R L  I K GS  T   S +SP +DG
Sbjct: 21  YSQHQDPAQLQRGLKLILKVGSNATPEYSANSPMVDG 57


>AY565195-1|AAS74205.1|  324|Drosophila melanogaster 5-HT1A protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 137 TASTGTAARANCCAF*TSVPTDRCCSATPDTIGPMAQSLFSCVQQIYSHAQHNSQTDRQL 316
           TA T T    N      S P     + +P T  P ++   +  QQ +  A H  Q  +QL
Sbjct: 160 TAKTSTLTSCN-----QSHPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHHQQQQQQQL 214

Query: 317 ASIKKP 334
           +SI  P
Sbjct: 215 SSIANP 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,808,669
Number of Sequences: 53049
Number of extensions: 424042
Number of successful extensions: 1258
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)