Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120251.Seq
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    28   0.10 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.96 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.96 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 572 SEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAI 709
           +E F    + F+  V      FE+R N    ++ +L S EKL+T +
Sbjct: 464 AESFDDMKDKFRRWVSAMSRPFEVRFNPHTGRVEVLDSVEKLETLV 509


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIIT 509
            FFA+   IQFF M  +RF   +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIIT 509
            FFA+   IQFF M  +RF   +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 385 PNAISTRWAHC 417
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 385 PNAISTRWAHC 417
           PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIITSPSV*RC 488
            FFA+   IQF  M  +RF  +A I+ S  +  C
Sbjct: 1333 FFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIITSPSV*RC 488
            FFA+   IQF  M  +RF  +A I+ S  +  C
Sbjct: 1333 FFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIITSPSV*RC 488
            FFA+   IQF  M  +RF  +A I+ S  +  C
Sbjct: 1333 FFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 580  FFAVC--IQFFYMF*NRFNFVAQIITSPSV*RC 488
            FFA+   IQF  M  +RF  +A I+ S  +  C
Sbjct: 1333 FFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 638 ELRLNELDAKLNMLQSAEKLKTAIVTESQNGTVTFPRDITKHSILAIFSE 787
           EL LNE   K+       K+K A  T++        + +  HS + +  E
Sbjct: 264 ELGLNEAQIKIWFQNKRAKIKKASGTKNPLALQLMAQGLYNHSTIPLTKE 313


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 515 DLRDKIESVLKHVKKLNTNSEKFMVTHETFK 607
           D +DK+  V   +K+        MVT++  K
Sbjct: 476 DYKDKLHKVAPRIKERMMKEGSMMVTYQAQK 506


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 816 KASLMRSSMRSENMAKMLCLVMSRGNVTVPFWL 718
           KA+      +  N+A  L  ++S+    +P WL
Sbjct: 508 KATSFFDEDQDRNLASDLAKILSQAKQEIPEWL 540


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 228 QVQIRAQRHNAKFYNVIDFCKGLEIAHDDILDCN 329
           + ++RA   N     V DFC+ L+ AH + +  N
Sbjct: 297 EAEVRAAAAN----KVKDFCQNLDKAHQESIIMN 326


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 321 QVCRRAQFQDLCKNLLHCRILRCVVV 244
           +V  R + Q LC  LL   ILR ++V
Sbjct: 718 EVWERKRRQYLCPVLLRVSILRNIIV 743


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,916
Number of Sequences: 336
Number of extensions: 3621
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)