Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120251.Seq
(818 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 34 0.16
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 31 0.85
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 31 1.1
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 30 2.0
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 30 2.6
SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31) 29 4.5
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 4.5
SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 4.5
SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 29 4.5
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 29 6.0
SB_47330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 29 6.0
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05) 29 6.0
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 28 7.9
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 28 7.9
SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) 28 7.9
SB_46143| Best HMM Match : zf-CCHC (HMM E-Value=0.26) 28 7.9
SB_4373| Best HMM Match : Porin_3 (HMM E-Value=0.0041) 28 7.9
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVGRLC 161
CAR T N CACC+ MN RC T+ G C
Sbjct: 244 CARCVTMNGCACCVTMNGYPRCVTMNGCAC 273
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVGRLC 161
CAR T N CA C+ MN RC T+ G C
Sbjct: 226 CARCVTMNGCARCVTMNGCARCVTMNGCAC 255
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 273 VIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILM 452
V+ FC G +H D L C W S + Y+ + F +K+K D L +F T + ++
Sbjct: 702 VVKFCNGKSSSHVDPLQCFWLS-RDYYDGVVDFFLKKTKED--HLNVVFLTPRTRAMVIC 758
Query: 453 R 455
R
Sbjct: 759 R 759
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 285 CKGLEIAHDDILDCNWDSDQVYHLN 359
C+ L +A +LDC W + VYH N
Sbjct: 43 CELLNLAEQQLLDCTWSTPGVYHGN 67
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 294 LEIAHDDILDCNWDSDQVYHLN 359
L +A +LDC W + +VYH N
Sbjct: 40 LNLAEQQLLDCTWSTPEVYHGN 61
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 262 FALCRCARICT*NCACCI 209
F LC C R C+ N ACC+
Sbjct: 106 FVLCTCHRACSCNVACCV 123
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -2
Query: 307 CAISRPLQKSITL*NFALC----RCARICT*N-CACCI*MNPI*RCATIVGRLC 161
C + +T+ + A C CAR T N CA C+ MN RC T+ G C
Sbjct: 192 CVTMNDCARCVTIYDCARCVTMNGCARCVTMNGCARCVTMNGYPRCVTMNGCTC 245
>SB_38872| Best HMM Match : Histone (HMM E-Value=3e-31)
Length = 242
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +2
Query: 470 QKQRVAAPSN*RRRDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL 649
+KQ N +R++ I VLK V S K M +F ND+ R RL
Sbjct: 18 KKQGEKKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRL 77
Query: 650 NELDAKLNMLQSAEKLKTAIVTESQNGTVTFPRD 751
+ + + S+ +++TA+ G TF +D
Sbjct: 78 AHYNKRSTI--SSREVQTAVRLLLPAGKTTFAKD 109
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVGRLC 161
CAR T N CA C+ MN RC T+ G C
Sbjct: 216 CARCVTMNGCARCVTMNGCPRCVTMNGCTC 245
>SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVG 170
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
>SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVG 170
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
>SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 497 N*RRRDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKL 670
N R + D+ + ES+ + +K L + K ++FK E +LNE AKL
Sbjct: 150 NKRDKKDVDEINESLRREIKALKSELSKAKTERDSFKAKCEKNERLLESKLNECKAKL 207
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 638 ELRLNELD-AKLN-MLQSAEKLKT---AIVTESQNGTVTFPRDITKHSILAIFSERIDDR 802
++ LN+ + AKL ++ EKLK A+ + QNGT TF D T AI + DR
Sbjct: 1649 KVHLNDKENAKLGRIVDEIEKLKNQIAALYSSRQNGTKTFEIDNTSFGWKAIIDQYNRDR 1708
Query: 803 IK 808
++
Sbjct: 1709 VE 1710
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 294 LEIAHDDILDCNWDSDQVYHLN 359
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_47330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 28.7 bits (61), Expect = 6.0
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +2
Query: 482 VAAPSN*RRRDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELD 661
+ PS R D+LR ++S+ HV +T + +V+ ET N+ + EL NE +
Sbjct: 94 IGIPSWQGRTDELRRTLKSLFSHVTPEDTKNLLVVVSVET-----TNKQKIIELLTNEFN 148
Query: 662 AKL--NMLQ----SAEKLKTAIVTESQNGTVTFPRDITKHSILAIFSERI 793
++L +LQ ++E LK +S G F IT + IF+ +
Sbjct: 149 SQLENGLLQVVSPTSEYLKVLAKPKSL-GLKNFGTGITPEFLTDIFANNL 197
>SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 503 RRRDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV-GNRFEQFELRLNELDAKLNML 679
+++DD + ++S +K V+ L + V + G+R + + +L ELD L +
Sbjct: 103 KQKDD--EPVDSFIKKVRLLASECRYDNVDEHIIDALIFGSRRPRVQAKLLELDKTLTLA 160
Query: 680 QSAEKLKTAIVTESQ----NGTVTFPRDITKHSIL 772
++ + +T T +Q GT T P T H L
Sbjct: 161 KAIDIARTEEATSAQLQDIRGTNTIPVHATTHKTL 195
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 294 LEIAHDDILDCNWDSDQVYHLN 359
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 294 LEIAHDDILDCNWDSDQVYHLN 359
L +A +LDC W + VYH N
Sbjct: 189 LNLAEQQLLDCTWSTPGVYHGN 210
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 294 LEIAHDDILDCNWDSDQVYHLN 359
L +A +LDC W + VYH N
Sbjct: 65 LNLAEQQLLDCTWSTPGVYHGN 86
>SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05)
Length = 431
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 330 WDSDQVYH--LNEIIFHKQKSKRDLNSLGALFATK---QGLLKILMRLNFDNKSNA 482
W +D+ H L++I F + + +N + LF K +GLLKI R + D +SN+
Sbjct: 313 WTADKGDHSILDKIAFCGRFANSFINPIVYLFQMKDFREGLLKICRRTDLDGRSNS 368
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 247 CARICT*N-CACCI*MNPI*RCATIVG 170
CAR T N CA C+ MN RC TI G
Sbjct: 702 CARCVTMNGCARCVTMNGCARCVTING 728
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 638 ELRLNELDAKLNMLQSAEKLKTAIVTESQNGTVTFPRDI-----TKHSILAIFSERID 796
E R+N+L+ KL+ LQ + + ESQ T R+I K +++ ++ +ID
Sbjct: 1632 EERVNDLERKLDELQQSNTRLLKELEESQASTAKLQRNIHNMDKAKQAVIELYDGKID 1689
>SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)
Length = 394
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 515 DLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAE 691
D I+ + K +K LNT EK+++ K V + E R E KL + + E
Sbjct: 115 DSEKTIKELHKDIKSLNTELEKYIMVESQLKEKVEQQEGMLE-RTREYTKKLQLAEVLE 172
>SB_46143| Best HMM Match : zf-CCHC (HMM E-Value=0.26)
Length = 245
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 503 RRRDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV-GNRFEQFELRLNELDAKLNML 679
+++DD + ++S +K V+ L + V + G+R + + +L ELD L +
Sbjct: 103 KQKDD--EPVDSFIKKVRLLASECRYDNVDEHIIDALIFGSRHPRVQAKLLELDKTLTLA 160
Query: 680 QSAEKLKTAIVTESQ----NGTVTFPRDITKH 763
++ + +T T +Q GT T P T H
Sbjct: 161 KAIDIARTEEATSAQLQDIRGTNTIPVHATTH 192
>SB_4373| Best HMM Match : Porin_3 (HMM E-Value=0.0041)
Length = 187
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 700 NRHRNGKPKWHGDVSARHYQTQHFGHI 780
N N +P+W V ++HYQ FG +
Sbjct: 44 NNFINDEPRWRDLVKSKHYQDNVFGFV 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,019,493
Number of Sequences: 59808
Number of extensions: 458433
Number of successful extensions: 1482
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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