Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120250.Seq
(443 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 2e-19
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 2e-19
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 92 2e-19
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 92 2e-19
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 78 4e-15
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 67 7e-12
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 46 2e-05
SB_4038| Best HMM Match : v110 (HMM E-Value=5.5) 38 0.005
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.011
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 34 0.061
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 33 0.11
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.57
SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1) 30 0.75
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 29 1.3
SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 29 1.7
SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 28 4.0
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 28 4.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 113
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 189
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 265
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 341
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 417
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 493
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 113
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 189
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 265
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 341
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/43 (44%), Positives = 33/43 (76%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVL 383
KI ++EG+P QRL++ ++L D++++ADYNI++ S LH+ L
Sbjct: 104 KIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 77.8 bits (183), Expect = 4e-15
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +3
Query: 276 VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 42
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 66.9 bits (156), Expect = 7e-12
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 359
+AKI DKEG+P DQQRLIFAGKQLED +T++DYNIQK
Sbjct: 105 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E EP++T+ ++K K+ K+ P
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 115
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 258 IADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
I K G P DQQRL+F G+ L D T I +TLH+++RL GG
Sbjct: 101 IEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_4038| Best HMM Match : v110 (HMM E-Value=5.5)
Length = 228
Score = 37.5 bits (83), Expect = 0.005
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 160 YL*MTTVAVNVPLPPPMVELCNRRPIPTP 74
YL + +N P PPP +++CN+RP+P+P
Sbjct: 50 YLKNASDLMNAPPPPPSLQVCNKRPLPSP 78
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.011
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 267 KEGVPVDQQRLIFAGKQLEDSKTMADYN 350
+EG+P ++QRLIF GK L+D K + +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.9 bits (74), Expect = 0.061
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 273 GVPVDQQRLIFAGKQLEDSKTMADYN 350
G+P ++QRLIF GK L+D K + +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 359
+++I K G+P D QRL F K+L D T+A N+++
Sbjct: 33 KSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 267 KEGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 365
K+ P +LI+AGK L D + +YNI ++S
Sbjct: 102 KDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 163 SVKMQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
SV M I KTL +T E ETV LKQK+ K
Sbjct: 64 SVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADK 100
>SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1)
Length = 159
Score = 30.3 bits (65), Expect = 0.75
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +3
Query: 171 NANIHQNIDGQNHYRRNGTRRDGGRSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 350
N N NIDG ++ N SQ +I K+ V QRL K E++ +YN
Sbjct: 88 NINGDNNIDGDSNIDGNNNNDVYDDSQQEIKSKKIVNKQLQRLAMQQKCCENANNRTNYN 147
Query: 351 IQKES 365
+S
Sbjct: 148 SSDKS 152
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 145 TVAVNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQ 5
TV +P P + + +P+PTP + SL L+S V+ QA +
Sbjct: 825 TVISALPSPTVVPTVPPAKPVPTPVVSSLTTPLVSATVLNASQAQTR 871
>SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 5 LHVGLIIFDYGRGNQLPLKGNNSWCGY 85
LH ++ D + +Q KGNNSWCG+
Sbjct: 462 LHHTVLSDDSKKRHQYCSKGNNSWCGF 488
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 360 ESTLHMVLRLRGG 398
ESTLH+VLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 360 ESTLHMVLRLRGG 398
ESTLH+VLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 5 LHVGLIIFDYGRGNQLPLKGNNSWCGY 85
LH ++ D + +Q KGNNSWCG+
Sbjct: 513 LHHTVLSDDSKKRHQYCPKGNNSWCGF 539
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
M ++I+TLTG P ET+ +K K+
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKI 30
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 GRSQAKIADKEGVPVDQQRLIFA-GKQLEDSKTMADYNIQKESTLHM 377
G + + +K G+ V RL+ GK++ D + DYNI T+ +
Sbjct: 88 GDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 127 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQ 17
PLPPP VE+ N P P + + +Q + V ++ Q
Sbjct: 15 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQ 51
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 127 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQ 17
PLPPP VE+ N P P + + +Q + V ++ Q
Sbjct: 463 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQ 499
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 197 RAKPLPPKRNPQRRWPISS 253
R P PPKR P+RR P +S
Sbjct: 1089 RRSPSPPKREPRRRSPSAS 1107
>SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -2
Query: 136 VNVPLPPPMVELCNRR----PIPTPRIISLQRQLISTP 35
VN P PPP+ RR P PTP L R++++ P
Sbjct: 281 VNYPTPPPLRRELVRRIVNYPTPTPLRRELVRRIVNYP 318
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 136 VNVPLPPPMVELCNRRPIPTPRIISLQR 53
V+ P PPP RR PR +S++R
Sbjct: 580 VSQPTPPPQTPSATRRTDTRPRPVSIER 607
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,530,280
Number of Sequences: 59808
Number of extensions: 322280
Number of successful extensions: 1088
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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