Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120250.Seq
(443 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 94 3e-20
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 94 3e-20
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 94 3e-20
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 94 3e-20
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 93 8e-20
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 93 8e-20
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 93 8e-20
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 93 8e-20
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 93 8e-20
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 93 8e-20
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 93 8e-20
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 93 8e-20
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 93 8e-20
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 93 8e-20
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 93 8e-20
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 93 8e-20
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 93 8e-20
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 93 8e-20
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 93 8e-20
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 93 8e-20
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 93 8e-20
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 92 1e-19
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 91 4e-19
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 75 2e-14
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 59 1e-09
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 52 2e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 46 1e-05
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 46 1e-05
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 38 0.002
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 38 0.003
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 36 0.009
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 36 0.009
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 35 0.021
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 34 0.038
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 34 0.038
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 34 0.050
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 34 0.050
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 34 0.050
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 33 0.087
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 32 0.15
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 32 0.20
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 31 0.26
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 31 0.26
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 31 0.35
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 31 0.35
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 31 0.35
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 31 0.35
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 31 0.35
At3g01050.1 68416.m00006 expressed protein 30 0.81
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 29 1.4
At1g24420.1 68414.m03077 transferase family protein similar to d... 29 1.4
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 28 2.5
At4g01150.1 68417.m00153 expressed protein 28 3.3
At1g24610.1 68414.m03096 SET domain-containing protein low simil... 28 3.3
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 27 4.3
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 4.3
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 27 4.3
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 27 4.3
At5g39560.1 68418.m04792 kelch repeat-containing F-box family pr... 27 5.7
At2g32350.1 68415.m03954 ubiquitin family protein contains INTER... 27 5.7
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 27 7.5
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 27 7.5
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 27 7.5
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 27 7.5
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 401
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 401
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 401
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 401
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 341
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 351
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+V + S ++ ++ LWP T
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 288
Query: 352 FKRNLLFTW 378
+R+LLFTW
Sbjct: 289 SRRSLLFTW 297
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 351
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+V + S ++ ++ LWP T
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 440
Query: 352 FKRNLLFTW 378
+R+LLFTW
Sbjct: 441 SRRSLLFTW 449
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 341
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 351
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+V + S ++ ++ LWP T
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 364
Query: 352 FKRNLLFTW 378
+R+LLFTW
Sbjct: 365 SRRSLLFTW 373
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 351
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+V + S ++ ++ LWP T
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 440
Query: 352 FKRNLLFTW 378
+R+LLFTW
Sbjct: 441 SRRSLLFTW 449
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 341
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 64.1 bits (149), Expect = 4e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 351
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+V + S ++ ++ LWP T
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 364
Query: 352 FKRNLLFTW 378
+R+LLFTW
Sbjct: 365 SRRSLLFTW 373
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 189
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 265
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +3
Query: 243 RSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
R + ++ +KEG+P QQRLI+AGKQL D KT DY I+ S LH+VL LRGG
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGG 152
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 33.5 bits (73), Expect = 0.066
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 178 IFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDL 300
I +KTLTGK I + EP +T+ +K+++ K+ P + + L
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKE +P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 85.8 bits (203), Expect = 1e-17
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+AD NIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 47.2 bits (107), Expect = 5e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLE 323
+AKI DKEG+P DQQRLIFAGKQLE
Sbjct: 254 KAKIQDKEGIPPDQQRLIFAGKQLE 278
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 113
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIP 188
Score = 43.6 bits (98), Expect = 6e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E + T+ ++K K+ K+ P
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIP 264
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 87.0 bits (206), Expect = 5e-18
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+ DQQRLIFAGKQ ED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 179 KAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/50 (70%), Positives = 44/50 (88%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI D EG+P DQ RLIFAGKQLED +T+ADYN+Q++STLH++LR RGG
Sbjct: 27 KAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGG 76
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ +LK K+ K+ P
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIP 113
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 186
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
MQIF+KTLTGKT E E ++T+ ++K K+
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKI 30
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 69.7 bits (163), Expect = 8e-13
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3
Query: 243 RSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 401
R + ++ +KEG+P QQRLI+AGKQL D KT DYNI+ S LH+VL LRGG+
Sbjct: 101 RIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
Score = 33.5 bits (73), Expect = 0.066
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 178 IFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP*INKDL 300
I +KTLTGK I + EP +T+ +K+++ K+ P + + L
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 93.1 bits (221), Expect = 8e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 37
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEGVP DQQRLIFAGKQL+D +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 105 KAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGG 154
Score = 89.8 bits (213), Expect = 7e-19
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL GG
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 79.0 bits (186), Expect = 1e-15
Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSK-TMADYNIQKESTLHMVLRLRGG 398
+AKI DKE + DQQRLIFAG+QLED T+ADYNIQKESTLH+VLRLRGG
Sbjct: 257 KAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 78.6 bits (185), Expect = 2e-15
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI D EG+P+DQQRLIF+GK L+D +T+ADY+IQK+S LH+ LRLRGG
Sbjct: 29 KAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGG 78
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF+KTLTGKTIT E E ++T+ ++K K+ K+ P
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVP 115
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
MQIF+ TLTGKTIT E E ++T+ ++K K+ K+
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKE 264
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
MQIF++TLT KTI E E ++T ++K K+ K+ P
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIP 191
Score = 31.9 bits (69), Expect = 0.20
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 166 VKMQIFIKTLTGKTITAETEPAETVADLKQKL 261
+ MQI KTLT KTIT + ++T+ ++K K+
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKI 32
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 90.6 bits (215), Expect = 4e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI +KEG+P+DQQRLIFAGKQLED T+ADYNIQKESTLH+VLRLRGG
Sbjct: 29 KAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGG 78
Score = 82.6 bits (195), Expect = 1e-16
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DKEG+ QQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL GG
Sbjct: 105 KAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AK+ DKE +P+D RLIFAGK LE +T+A YNIQK STL++V R R G
Sbjct: 269 KAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCG 318
Score = 63.3 bits (147), Expect = 7e-11
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+AKI DK G P DQQ L+F G QL+D +T+ DYNI+ ESTLH+ +R G
Sbjct: 419 KAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHG 468
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 392
KI KEG+ DQQ LIF G+QLED T+ DY+I K+STL++VLRLR
Sbjct: 580 KIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
+ KI K G+P+D+QRLIF G+ L S+T+ DYNIQK ST+H + RGG
Sbjct: 502 KVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQL--EDSKTMADYNIQKESTLHMVLRLRG 395
+AKI D+EG+ D QRLIF G++L ED++T+ADY I+ STL + LRLRG
Sbjct: 186 KAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Frame = +3
Query: 249 QAKIADKEGVPVDQ--QRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 392
+A + DKEG+ QRLIF GK+L+D T+ADY+IQKESTLH+VL ++
Sbjct: 345 KAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
MQIFIKTLTGKTI E E ++T+A++K+K+ +K+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKE 585
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
MQIF++TLTGKTIT E + ++T+ ++K K+ K+
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKE 112
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
+QI+ KTLT KTIT + E ++++ ++K K+ K+ P
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIP 39
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
MQIF+KTLT K I E E +T+ ++K + K+
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKE 352
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 130 HSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
+S Q S + + MQIF+K GK IT E ++T+ +K K+ K P
Sbjct: 379 YSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSP 429
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAET-----EPAETVADLKQKL 261
MQIF+ T +GK T++T E ++T+ ++K K+
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKI 189
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 389
+AKI DK+G+PVDQQRLIF GKQLED T+ADYNIQ +S LH++ RL
Sbjct: 112 KAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
M IFIKTLTG+ I E E +T+ ++K K+ K+ P
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIP 122
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +3
Query: 243 RSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
R + +I +KEG+P QR+++ GKQL D T YN+++ S LH+VL LRGG
Sbjct: 25 RIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 386
KIA + GVPV QQRLIF G+ L+D +++Y+++ TLH+++R
Sbjct: 52 KIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 258 IADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 380
+A VP +QQRLI+ G+ L+D +T+ Y +Q + T+HMV
Sbjct: 47 VAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 258 IADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 380
IA VP +QQRLI+ G+ L+D +T+ Y +Q + T+HMV
Sbjct: 47 IAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 371
++ I D+ G PVDQQ L G +L+++ T++DYNI+ ++ L
Sbjct: 167 KSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 13/60 (21%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGK-------------QLEDSKTMADYNIQKESTLHMVLRL 389
+AK +KEG+PV+QQRLIF G+ ++ DS D I E T +VLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
M IFIKTLTG+T T E + ++T+ +LK K K+ P
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIP 86
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLK 252
M I IKTL GK I E E + DLK
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/46 (32%), Positives = 32/46 (69%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 392
+I K +P +QR+I+ GKQL+ ++ Y+I+++++L +V R++
Sbjct: 124 RIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKESTLHMVLRL 389
+I G V Q+L+F G++L S + M DY + + + LH+VL+L
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL 107
Score = 33.5 bits (73), Expect = 0.066
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 231 RDGGRSQAKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 386
R+ G + +I+ K G V D+Q +++ G++LED + D +S LH+++R
Sbjct: 131 RNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKESTLHMVLRL 389
+I G V Q+L+F G++L S + M DY + + + LH+VL+L
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL 107
Score = 33.5 bits (73), Expect = 0.066
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 231 RDGGRSQAKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 386
R+ G + +I+ K G V D+Q +++ G++LED + D +S LH+++R
Sbjct: 131 RNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 35.1 bits (77), Expect = 0.021
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 189 NIDGQNHYRRNGTRRDGGRSQAKIADK-EGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 365
N+ G+ G +AK + K + + ++ + GK+LED K++A+ N+Q S
Sbjct: 506 NLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNS 565
Query: 366 TLHMV 380
+H++
Sbjct: 566 LVHLL 570
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 34.3 bits (75), Expect = 0.038
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHMVLRL 389
+I G V +Q+L+F+G++L ++ + DY + S LH+VL+L
Sbjct: 62 RIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKL 107
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 228 RRDGGRSQAKIADK-EGVP-VDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 386
RR+ G + +I+ + +G P VD Q ++F G++L+D++ + S +H++++
Sbjct: 130 RRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVK 184
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 34.3 bits (75), Expect = 0.038
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 240 GRSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 398
G + KIA + +P ++Q+L L+D+ ++A YN+ L + LR RGG
Sbjct: 730 GSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 33.9 bits (74), Expect = 0.050
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKLPIKK 273
M+IF+KTL+G E +PA+ V+D+K + K
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVK 34
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 33.9 bits (74), Expect = 0.050
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 371
KI +G+PV +Q L GK LED DY I ES L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 33.9 bits (74), Expect = 0.050
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 371
KI +G+PV +Q L GK LED DY I ES L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRL 67
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
M ++I T TG + + + ETV ++K+K+
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKI 30
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 33.1 bits (72), Expect = 0.087
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +3
Query: 279 PVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 380
P Q RL+F G+ L++ + ++DY++++ TL++V
Sbjct: 48 PERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 32.3 bits (70), Expect = 0.15
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 294 RLIFAGKQLEDSKTMADYNIQKESTLHMV 380
++ + GK+L+D K++A N+Q S +H++
Sbjct: 703 KMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 31.9 bits (69), Expect = 0.20
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 377
KI + +PV +Q + F GK LED + +++I + LH+
Sbjct: 29 KIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 279 PVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 386
PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 38 PVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 279 PVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 386
PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 38 PVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 279 PVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 386
PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 38 PVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
M+IF+KTL G E +P ++V D+K+ +
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNI 30
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
M+IF+KTL G E +P ++V D+K+ +
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNI 30
>At3g01050.1 68416.m00006 expressed protein
Length = 117
Score = 29.9 bits (64), Expect = 0.81
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +3
Query: 264 DKEGVP--VDQQRLIFAGKQLEDSKTMADY 347
+KE P V + +LI AGK LE+SKT+ DY
Sbjct: 45 EKENGPKTVKEVKLISAGKVLENSKTVKDY 74
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL 261
MQ+FI GK E E T+AD+K K+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKI 30
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 249 QAKIADKEGVPVDQQRLIFAGK---QLEDSKTMADYNIQKESTLHMVLRLRGG 398
+ KI D G+ Q L GK ++ TM DY I+ HM R+RGG
Sbjct: 27 KTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSDRMRGG 79
>At1g24420.1 68414.m03077 transferase family protein similar to
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034],
acetyl-CoA:benzylalcohol acetyltranferase [Clarkia
concinna][GI:6166330][PMID:10588064]
Length = 436
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 32 YGRGNQLPLKGNNSWC 79
YGRGN++ L +NSWC
Sbjct: 349 YGRGNEMDLWMSNSWC 364
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLKQKL-----PIKK 273
M IF+ TL GKT E + +E + +K + P+KK
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQVPPVKK 87
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 172 MQIFIKTLTGKTITAETEPAETVADLK 252
M+I IKT GKTI E E + D+K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At4g01150.1 68417.m00153 expressed protein
Length = 164
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 82 VSAACCTIP---PSVEARAHSQQPLSFIS-NSVKMQIFIKTLTGKTITAETEPAETVADL 249
VS C +P P R+ PL +S N ++ +KT T+ + E + DL
Sbjct: 21 VSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEETSSIDTNELITDL 80
Query: 250 KQK 258
K+K
Sbjct: 81 KEK 83
>At1g24610.1 68414.m03096 SET domain-containing protein low
similarity to SP|Q43088 Ribulose-1,5 bisphosphate
carboxylase/oxygenase large subunit N-
methyltransferase, chloroplast precursor (EC 2.1.1.127)
{Pisum sativum}; contains Pfam profile PF00856: SET
domain
Length = 476
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 133 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIK 26
+VP+ P++++CN P RII Q S ++K
Sbjct: 229 DVPMMLPLIDMCNHSFKPNARIIQEQNGADSNTLVK 264
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 240 GRSQAKIADKEGVPVDQQRLIFAGKQLED 326
G + IA G+ +QRL+F GK+ ED
Sbjct: 102 GELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 130 VPLPPPMVELCNRR-PIPTPRIISLQRQLISTP 35
VPLPPP L RR P+P P L R+ P
Sbjct: 13 VPLPPPPPPLMRRRAPLPPPPPPPLMRRRAPPP 45
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 371
KI +G PV +Q LIF K L+D M I+ S +
Sbjct: 30 KIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 255 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 371
KI +G PV +Q LIF K L+D M I+ S +
Sbjct: 64 KIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRI 102
>At5g39560.1 68418.m04792 kelch repeat-containing F-box family
protein contains Pfam PF00646: F-box domain; contains
Pfam PF01344 : Kelch motif
Length = 395
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +3
Query: 216 RNGTRRDGGRSQAKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRG 395
R+ T RDG +D V +DQ+ + G+++++S + K T + R
Sbjct: 150 RSNTWRDGPNMTVARSDPVAVLIDQRIYVLGGREMDESDDWFEVFDIKTQTWRALPSFRA 209
Query: 396 G 398
G
Sbjct: 210 G 210
>At2g32350.1 68415.m03954 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 233
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 SFISNSV-KMQIFIKTLTGKTITAETEPAETVADLKQKLPIKKVCP 282
SFI +V K+ + +K K T E + ETV+ LK K+ I + P
Sbjct: 66 SFIHAAVRKIHVTVK-FPSKQFTVEVDRTETVSSLKDKIHIVENTP 110
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 173 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 3
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,121,188
Number of Sequences: 28952
Number of extensions: 219178
Number of successful extensions: 839
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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