Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120249.Seq
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    36   0.002
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         27   1.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.4  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   9.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
 Frame = +2

Query: 554 SCPNCGKTFSYASDLYDHLK----GSTDLTRACYVCARIMSEH-DLVEHLREKHH*-KPF 715
           SC  C   F+ ++ L  H      G+  + + C +C        DL  H++  H   KP 
Sbjct: 269 SCDVCFARFTQSNSLKAHKMIHQVGNKPVFQ-CKLCPTTCGRKTDLRIHVQNLHTADKPI 327

Query: 716 NCNKCAVLLRSYKHYKSTWQTLTGPVCVRVETADDHSNLCRHTTLHLSVHT 868
            C +C         YK   +T  G  C R E     S   RH   HL +HT
Sbjct: 328 KCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHT 378



 Score = 27.9 bits (59), Expect = 0.44
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
 Frame = +2

Query: 557 CPNCGKTFSYASDLYDH-LKGSTDLTRACYVC-----ARIMSEHDLVEHLREKHH*KPFN 718
           C  C  TF    D Y + +   T     CY C     A I   H L  HL      KP+ 
Sbjct: 329 CKRCDSTFP---DRYSYKMHAKTHEGEKCYRCEYCPYASISMRH-LESHLLLHTDQKPYK 384

Query: 719 CNKCAVLLR 745
           C++CA   R
Sbjct: 385 CDQCAQTFR 393



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 461 RNIHHRRLIKTK*NNQHSPIKSKEYGKSLQCSCPNCGKTFSYASDLYDHL 610
           +    ++L+K   N  H+P       K+    CP C + F +  +L  H+
Sbjct: 390 QTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHM 439


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 185 WPSVVSPIQIRHFSAPSPLTRWEINAFT 102
           WP V   +  R+F AP+PLT  + +  T
Sbjct: 121 WPVVRRMVSFRNFVAPAPLTNVQYSGGT 148


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 730 CCSAPLVQTLQKHMADAHRPGVCTCGDCGRSF 825
           C S     + + H A+ HRP    C  CG+ F
Sbjct: 901 CVSCHKTVSNRWHHANIHRPQSHECPVCGQKF 932


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 564 FGHEHCKLLPYSLLLIGEC*LFYFVLMSLR*WIFRCQIRQHKSW 433
           FG   CKL+PY   +     ++  V +SL  +   C+    + W
Sbjct: 176 FGSVMCKLIPYFQAVSVSVAVWTLVAISLERYFAICRPLSSRRW 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 988,649
Number of Sequences: 2352
Number of extensions: 21178
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)