Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120248.Seq
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.7  
AF164151-1|AAD47075.1|  148|Anopheles gambiae translation initia...    24   6.3  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   8.4  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 418 LKSEPFVDVNKVEIYFVKLLPVINDLITKNSAKVTTTFQI 537
           +KS    +++    YFV +  V  D   K  AK+T T Q+
Sbjct: 368 VKSHTISELSPFTTYFVNVSAVPTDYSYKPPAKITVTTQM 407


>AF164151-1|AAD47075.1|  148|Anopheles gambiae translation
           initiation factor 4C (1A) protein.
          Length = 148

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 191 LIGHNEINDSKLDTIVKETMD 253
           LIG  +  DSK D I+K T D
Sbjct: 78  LIGLRDYQDSKADVILKYTPD 98


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 209 FHCDQLNNTPCFLEDHL 159
           +H   + +TPC++E HL
Sbjct: 433 YHRQDVTSTPCWIEIHL 449


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,861
Number of Sequences: 2352
Number of extensions: 12413
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)