Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120248.Seq
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040231-1|AAH40231.1| 866|Homo sapiens ANKHD1 protein protein. 31 6.5
AK024189-1|BAB14849.1| 619|Homo sapiens protein ( Homo sapiens ... 31 6.5
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat... 31 6.5
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat... 31 6.5
BC104723-1|AAI04724.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.6
BC098272-1|AAH98272.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.6
BC098122-1|AAH98122.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.6
BC068513-1|AAH68513.1| 576|Homo sapiens ARHGEF3 protein protein. 30 8.6
BC054345-1|AAH54345.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.6
AK024340-1|BAB14891.1| 412|Homo sapiens protein ( Homo sapiens ... 30 8.6
AF433662-1|AAP97313.1| 558|Homo sapiens RhoGEF protein protein. 30 8.6
AF249744-1|AAF79954.1| 526|Homo sapiens RhoGEF protein. 30 8.6
AB209661-1|BAD92898.1| 537|Homo sapiens Rho guanine nucleotide ... 30 8.6
>BC040231-1|AAH40231.1| 866|Homo sapiens ANKHD1 protein protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.5
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 440 STKGSLFNFNTPLVMT*SSTSN*FLLGGIDLVTNKFATSSMTHEKLLLTDDIVTEITSSL 261
STK NF++ + T +S+ N F LG LVT++ T S L ++ T + SS
Sbjct: 167 STKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSF 226
Query: 260 SKCPLFL*QLYP 225
P+ L YP
Sbjct: 227 ---PVSLPLAYP 235
>AK024189-1|BAB14849.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ14127 fis, clone MAMMA1002573, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 619
Score = 30.7 bits (66), Expect = 6.5
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 440 STKGSLFNFNTPLVMT*SSTSN*FLLGGIDLVTNKFATSSMTHEKLLLTDDIVTEITSSL 261
STK NF++ + T +S+ N F LG LVT++ T S L ++ T + SS
Sbjct: 219 STKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSF 278
Query: 260 SKCPLFL*QLYP 225
P+ L YP
Sbjct: 279 ---PVSLPLAYP 287
>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 2 protein.
Length = 2617
Score = 30.7 bits (66), Expect = 6.5
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 440 STKGSLFNFNTPLVMT*SSTSN*FLLGGIDLVTNKFATSSMTHEKLLLTDDIVTEITSSL 261
STK NF++ + T +S+ N F LG LVT++ T S L ++ T + SS
Sbjct: 1784 STKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSF 1843
Query: 260 SKCPLFL*QLYP 225
P+ L YP
Sbjct: 1844 ---PVSLPLAYP 1852
>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 1 protein.
Length = 2542
Score = 30.7 bits (66), Expect = 6.5
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 440 STKGSLFNFNTPLVMT*SSTSN*FLLGGIDLVTNKFATSSMTHEKLLLTDDIVTEITSSL 261
STK NF++ + T +S+ N F LG LVT++ T S L ++ T + SS
Sbjct: 1784 STKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSF 1843
Query: 260 SKCPLFL*QLYP 225
P+ L YP
Sbjct: 1844 ---PVSLPLAYP 1852
>BC104723-1|AAI04724.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 130 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 174
>BC098272-1|AAH98272.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 130 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 174
>BC098122-1|AAH98122.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 130 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 174
>BC068513-1|AAH68513.1| 576|Homo sapiens ARHGEF3 protein protein.
Length = 576
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 180 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 224
>BC054345-1|AAH54345.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 130 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 174
>AK024340-1|BAB14891.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ14278 fis, clone PLACE1005549, weakly similar to
Homo sapiens mRNA for Rho guanine nucleotide-exchange
factor, ).
Length = 412
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 16 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 60
>AF433662-1|AAP97313.1| 558|Homo sapiens RhoGEF protein protein.
Length = 558
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 162 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 206
>AF249744-1|AAF79954.1| 526|Homo sapiens RhoGEF protein.
Length = 526
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 130 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 174
>AB209661-1|BAD92898.1| 537|Homo sapiens Rho guanine nucleotide
exchange factor 3 variant protein.
Length = 537
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 8 VGQGIEDLIKRIEKTVKRVVEPVLLKKKITLQEVEQMFWSIQTIL 142
+ QG EDLI+ ++ K +P+L +T QE+ Q+F ++ +++
Sbjct: 141 LSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFGTLDSLI 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,915,922
Number of Sequences: 237096
Number of extensions: 1858705
Number of successful extensions: 2648
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2646
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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