Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120247X.Seq
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.68 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   4.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   6.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.4  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 404 YIAGTPIVDQR-GGVISVVVAKKNNHYAVSSFEGEGDTLRAHKTG 535
           Y A + + D R GGV+S     ++ HY  +    +G   RA + G
Sbjct: 4   YFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGRRRAARPG 48


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 427 DDGRAGDVPVRRLEGRRAPP 368
           DDG++ DVPV  L+     P
Sbjct: 213 DDGKSEDVPVISLKNENELP 232


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +1

Query: 160 PYCRYTAARPKSWSDALRARTTTAACSPTNCC 255
           PY +YT    K+W        T     P + C
Sbjct: 250 PYIQYTETETKTWGSVF---NTVLELMPKHAC 278


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 573 PVRIAACSRFNHLPVL 526
           PV +    R+NH+P++
Sbjct: 297 PVDLLESGRYNHVPIM 312


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 573 PVRIAACSRFNHLPVL 526
           PV +    R+NH+P++
Sbjct: 297 PVDLLESGRYNHVPIM 312


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 573 PVRIAACSRFNHLPVL 526
           PV +    R+NH+P++
Sbjct: 297 PVDLLESGRYNHVPIM 312


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 573 PVRIAACSRFNHLPVL 526
           PV +    R+NH+P++
Sbjct: 297 PVDLLESGRYNHVPIM 312


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 573 PVRIAACSRFNHLPVL 526
           PV +    R+NH+P++
Sbjct: 296 PVDLLESGRYNHVPIM 311


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 233 RVHRRTAAPLEELAYVRLDENTAEKVFI 316
           +VH++TA   +   Y  LD     KVFI
Sbjct: 296 QVHKQTAICFKAPRYHTLDITEPVKVFI 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,641
Number of Sequences: 336
Number of extensions: 2624
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)