Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120247X.Seq
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2 pr...    31   2.5  
AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2 pr...    31   2.5  
AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein pr...    31   4.4  

>BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2
            protein.
          Length = 1849

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 594  AVRESQLPVRIAACSRFNHLPVLC 523
            AV++S LP R+A C R N LPV+C
Sbjct: 1162 AVQDSSLP-RVARCYRHNRLPVVC 1184


>AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2
            protein.
          Length = 1849

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -3

Query: 594  AVRESQLPVRIAACSRFNHLPVLC 523
            AV++S LP R+A C R N LPV+C
Sbjct: 1162 AVQDSSLP-RVARCYRHNRLPVVC 1184


>AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein
           protein.
          Length = 143

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 24/82 (29%), Positives = 34/82 (41%)
 Frame = -2

Query: 622 APQRARGGRCXSGKSTPRTHSRLQPVQPPSSFVCSQSIAFTLEGGDGIVVVFLRHNDGDD 443
           APQ  R G   +     R  S L  V P  S   ++  A+T+    G       H     
Sbjct: 18  APQETRNGTADAASKEGRKSS-LPSVAPTGSASAAEDGAYTVRPSSG------PHGSQPF 70

Query: 442 APALVDDGRAGDVPVRRLEGRR 377
             A++  GR  + P+RRL+G R
Sbjct: 71  TLAVLLRGRVFNTPIRRLDGGR 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,759,137
Number of Sequences: 237096
Number of extensions: 1794713
Number of successful extensions: 4423
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4417
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)