Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120246.Seq
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.56 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.74 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   4.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   4.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   6.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 629 LFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCA-LYIMIATVWSL 763
           LF + +SF     +  L  +L+     F+SFM + L+  +A+ W L
Sbjct: 73  LFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 619 YGYIVCFSYEFYYCYGFRMFENE 687
           +GY+ C S  FY  +   +  N+
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQ 92


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +2

Query: 575 TMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSL-MFNSFMCALYIMIAT 751
           T+G     +  K+C +VI+F  ++   ++      K  L D  L  FN+F   L  +++ 
Sbjct: 29  TVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSL 88

Query: 752 VW-SLKII*LVFTLQIYKVFK 811
              S   I L+ +    K FK
Sbjct: 89  SGNSAVFIMLIISFMHKKSFK 109


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 769 YF*RPHCCNHNVQSAHKR 716
           YF  PH C+ N+QS   R
Sbjct: 342 YFRMPHRCHGNLQSCPTR 359


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 459 STARY*STWLGTASFRKLLHGLLW 388
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 613 MLYGYIVCFSYEFYYCY 663
           M   YI CF    YY Y
Sbjct: 1   MFLAYIACFLLLLYYIY 17


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 769 YF*RPHCCNHNVQSAHKR 716
           YF  PH CN N  +   R
Sbjct: 334 YFRMPHKCNGNAHNCPSR 351


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 769 YF*RPHCCNHNVQSAHKR 716
           YF  PH CN N  +   R
Sbjct: 341 YFRMPHKCNGNAHNCPSR 358


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 727 RFVHYDCNSVVFKNNLTSFYASNLQS 804
           R+ H D  S++    + ++YA+ L S
Sbjct: 24  RYDHLDVESILNNRRMVNYYAACLLS 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,032
Number of Sequences: 336
Number of extensions: 4417
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)