Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120245.Seq
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   6.8  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   6.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.0  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 394 ITIFTSGSIGLSIWMESQTVDRTKVTFHSA 305
           + IFT  SI + IW  S++  R + +  SA
Sbjct: 218 VLIFTYTSICIEIWQSSESSLRPRSSQKSA 247


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 276 KRASNLPFWLMW 241
           +RA  L FW MW
Sbjct: 404 RRADVLKFWFMW 415


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 824 DQDERSELFITNIF 783
           D DE+++L ITNI+
Sbjct: 42  DVDEKNQLLITNIW 55



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 827 PDQDERSELFITNIFRTTIFMN 762
           PD  E+  L +T +   T+F+N
Sbjct: 237 PDSGEKLTLGVTILLSLTVFLN 258


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 824 DQDERSELFITNIF 783
           D DE+++L ITNI+
Sbjct: 42  DVDEKNQLLITNIW 55



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 827 PDQDERSELFITNIFRTTIFMN 762
           PD  E+  L +T +   T+F+N
Sbjct: 237 PDSGEKLTLGVTILLSLTVFLN 258


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 827 PDQDERSELFITNIFRTTIFMN 762
           PD  E+  L +T +   T+F+N
Sbjct: 237 PDSGEKLTLGVTILLSLTVFLN 258


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 827 PDQDERSELFITNIFRTTIFMN 762
           PD  E+  L +T +   T+F+N
Sbjct: 237 PDSGEKLTLGVTILLSLTVFLN 258


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 827 PDQDERSELFITNIFRTTIFMN 762
           PD  E+  L +T +   T+F+N
Sbjct: 237 PDSGEKLTLGVTILLSLTVFLN 258


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 60  SRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAAL 182
           SR     I  SK ++       +  L K++KT++PV   AL
Sbjct: 11  SRQKAPKIVNSKYNSILNIALKNFRLCKKHKTKKPVQILAL 51


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 60  SRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAAL 182
           SR     I  SK ++       +  L K++KT++PV   AL
Sbjct: 11  SRQKAPKIVNSKYNSILNIALKNFRLCKKHKTKKPVQILAL 51


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
          protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 76 IVPSRESCISVIWWVCSLTEWIFLP 2
          ++P     ISV WW   ++E  +LP
Sbjct: 12 LIPVSVILISVGWWENFVSETSYLP 36


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 76  IVPSRESCISVIWWVCSLTEWIFLP 2
           ++P     ISV WW   ++E  +LP
Sbjct: 245 LIPVSVILISVGWWENFVSETSYLP 269


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 76  IVPSRESCISVIWWVCSLTEWIFLP 2
           ++P     ISV WW   ++E  +LP
Sbjct: 245 LIPVSVILISVGWWENFVSETSYLP 269


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 748 YIQALFIKMVVRKILVINNSLLSSW 822
           Y+Q +F+K       +I+N  + SW
Sbjct: 217 YLQHIFVKSRPSPATIISNVTVISW 241


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 654 INWSFLELVTICLFTHIC 707
           + W+FL+++ I    ++C
Sbjct: 271 LQWAFLQILEILALAYLC 288


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 748 YIQALFIKMVVRKILVINNSLLSSW 822
           Y+Q +F+K       +I+N  + SW
Sbjct: 217 YLQHIFVKSRPSPATIISNVTVISW 241


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 748 YIQALFIKMVVRKILVINNSLLSSW 822
           Y+Q +F+K       +I+N  + SW
Sbjct: 537 YLQHIFVKSRPSPATIISNVTVISW 561


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 1   LVKKSTLLKSIPTKSPI 51
           L +++ LL+ +PT SP+
Sbjct: 105 LSERAALLRGVPTLSPV 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,385
Number of Sequences: 336
Number of extensions: 4517
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)