Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120245.Seq
(827 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 108 1e-24
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 42 8e-05
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 40 6e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 38 0.001
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 38 0.001
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 38 0.002
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 37 0.003
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 37 0.003
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 36 0.007
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 36 0.007
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 36 0.009
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 35 0.012
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.016
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 34 0.021
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 34 0.028
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 34 0.028
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 33 0.037
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 33 0.037
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 33 0.049
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.065
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 33 0.065
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.065
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 33 0.065
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 32 0.11
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 32 0.11
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 31 0.15
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 31 0.15
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 31 0.26
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.26
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 31 0.26
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 30 0.35
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 0.35
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 30 0.46
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 30 0.46
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 30 0.46
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 29 0.61
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.61
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.61
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 29 0.80
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.80
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 1.1
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 29 1.1
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 1.1
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 1.1
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 28 1.4
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 28 1.4
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 28 1.4
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 2.5
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 27 2.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 3.2
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 27 4.3
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 5.7
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 26 5.7
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 26 5.7
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 26 5.7
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 26 7.5
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 26 7.5
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 26 7.5
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 9.9
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 25 9.9
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 9.9
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 25 9.9
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 108 bits (259), Expect = 1e-24
Identities = 43/63 (68%), Positives = 54/63 (85%)
Frame = +2
Query: 251 QKGKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFD 430
++GKF+ARF+H + EEE GRVKGHFGPIN++A HP G YASGGEDGYVRVH FD++YFD
Sbjct: 264 RQGKFEARFYHAILEEELGRVKGHFGPINTIAVHPKGTGYASGGEDGYVRVHFFDKNYFD 323
Query: 431 YTF 439
+ +
Sbjct: 324 FKY 326
Score = 83.0 bits (196), Expect = 5e-17
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 GKKIHSVKEHTH--QITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSA 176
G+ + S + H ITD+Q D T FIT+ KD TAK D +S E++K Y T+ P+N++
Sbjct: 179 GEFVESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNTS 238
Query: 177 ALSPILDHVVLGGGQDAMEVTTTSTRR 257
+ +P+ D V+LGGGQ+A +VTTT+ R+
Sbjct: 239 SFTPVQDFVILGGGQEARDVTTTAARQ 265
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 42.3 bits (95), Expect = 8e-05
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYK-TERPVNSAAL 182
+ + ++K H + +Q+S+DG + +AS+D T KL+D+++ E++ + R V + +
Sbjct: 456 RAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSF 515
Query: 183 SPILDHVVLGGGQDAMEVTTTSTRRVNSMLVSST 284
+P + G G + + T++ L T
Sbjct: 516 NPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHT 549
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 3 GKKIHSVKE-HTHQITDMQLSRDGTMFITASKDHTAKLFDTN 125
G ++ V E HT + + S DG T +KD+T +L++ N
Sbjct: 353 GTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLN 394
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
+K H P+ ++ P A+GG +G V+V + +Y ++F
Sbjct: 99 MKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSF 141
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 296 EEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
E G ++GH + + +F+P + ASG D +R+ N D
Sbjct: 498 EVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
+GH I L F P G SG D V+V N
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNF 412
R GH GP+ +AFHP + SGG+D V V N+
Sbjct: 48 RFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNY 82
Score = 29.5 bits (63), Expect = 0.61
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 299 EFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
E +GHF ++ FHP + S ED +RV + ++ TF
Sbjct: 248 EVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTF 294
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNS 128
I ++ H I D+ + DGT F TAS DHT KL+ S
Sbjct: 470 IERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKS 508
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 6 KKIHSVKE-HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY 149
+++H++K+ H Q+ ++ + DGT F + D+ +FD +SLE K Y
Sbjct: 279 RRVHTIKKVHQEQVCGLEWNYDGTQFASGGNDNLVCIFDIDSLENKKFY 327
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
K H + L ++ DG +ASGG D V + + D
Sbjct: 286 KVHQEQVCGLEWNYDGTQFASGGNDNLVCIFDID 319
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY 149
H + D S D T +TAS DH A+L++ +S E +++Y
Sbjct: 258 HQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQY 297
Score = 34.7 bits (76), Expect = 0.016
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDY 445
+GH + ++AFH DGK A+ EDG V+V + +D+
Sbjct: 80 EGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDH 123
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 30 HTHQITDMQ-LSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHVV 206
H ITD+ D +F ++S DHT K++D ++L+ + E + S A SPI H +
Sbjct: 102 HKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCL 161
Query: 207 L 209
+
Sbjct: 162 I 162
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
H+G +N LA+ D + AS G D +RV N +
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNME 276
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVN 170
+ + + H I D+ S+DG F++ S D T KL+DT + L + ++R N
Sbjct: 303 LRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTN 355
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+GH PI L+F DG+S+ S D +++
Sbjct: 307 QGHARPIRDLSFSQDGRSFLSTSFDKTIKL 336
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKS 367
++ H GP+ S+AFHP S
Sbjct: 523 KLPAHSGPVQSMAFHPQETS 542
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVR 400
H G INS+ F +GK + + +D +R
Sbjct: 395 HLGGINSITFLENGKRFVTTSDDSSMR 421
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 35.9 bits (79), Expect = 0.007
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY 149
G +++ + H I + S D + F+T+S ++ K++D N+ L++E+
Sbjct: 221 GDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSLIREW 269
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 21 VKEHTHQ--ITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALS 185
VK TH+ + D+ ++RDG +TA D K++D + + L Y T P LS
Sbjct: 259 VKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKELHSYYTPTPAQRLTLS 315
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRV 403
H GP+ LA + DG+ + G D ++V
Sbjct: 264 HRGPVRDLAVNRDGRYMVTAGADSLLKV 291
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 224 CYGSDNHINQKGKFDARFFH---LVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGY 394
C + H+ G H + + G ++GH + LA+ DG ASGG D
Sbjct: 268 CLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 327
Query: 395 VRVHNFDQSYFDYT 436
V++ + S +T
Sbjct: 328 VQIWDARSSIPKFT 341
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.1 bits (77), Expect = 0.012
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALS 185
K+I + HT + D+ +S DG +TAS D T KL+ + + L + A S
Sbjct: 207 KRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSFIAHSDSVWALYS 266
Query: 186 PILDHVVLGGGQDAMEVTTTSTR 254
D V G + +T T R
Sbjct: 267 EHPDLKVFYAGDRSGLITRTDIR 289
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.016
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTLVF 481
GH G ++++ PDG ASGG DG + + + ++S Y+ + N LVF
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN---INALVF 241
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFD 119
G+ H HT + + +S D ++ S+D T K+++
Sbjct: 95 GECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
GH + S++ PD + SG D +++ N
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 15 HSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFD 119
H +K H IT + +S+DG+ ++ S D+T ++FD
Sbjct: 213 HVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFD 247
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+KGH I SLA DG S S D VR+
Sbjct: 215 LKGHKDIITSLAISKDGSSLLSNSMDNTVRI 245
Score = 25.4 bits (53), Expect = 9.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
GH + F P G +ASGG D + + N
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWN 78
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 272 RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
+F+ L + + +GH + S+ F PDG+ +ASG D R+ + D
Sbjct: 563 QFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
+ ++AF PDGK +G ED +++ + Y F
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVF 398
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
R++GH + S+AF PD SG D ++V
Sbjct: 479 RLEGHKESVYSIAFSPDSSILLSGSLDKTIKV 510
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 33.9 bits (74), Expect = 0.028
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELL 140
++IH H + I + S+D ++ T+S D T+K+FD ++ + +
Sbjct: 171 RRIHGWLAHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCI 215
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 33.5 bits (73), Expect = 0.037
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+GH I S+ HPDG A+GG DG +R+
Sbjct: 15 RGHRLSIFSIHIHPDGSRIATGGLDGTIRI 44
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 421
H G + S+ F P+G+ ASG +D V + + +++
Sbjct: 73 HTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEA 106
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 33.5 bits (73), Expect = 0.037
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELL 140
H + +LS+D +FIT + D + K+FD S++L+
Sbjct: 89 HNAMLLSAELSQDERLFITGADDKSLKVFDVESIDLV 125
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 33.1 bits (72), Expect = 0.049
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLE 134
K+ H +H+ ++ + S +G +ASKD TA +FD +L+
Sbjct: 204 KEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLK 246
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 39 QITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVN---SAALSPILDHVVL 209
++T + LS+D +T + HT L+D ++++Y + N + D VL
Sbjct: 385 KVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVL 444
Query: 210 GGGQD 224
G +D
Sbjct: 445 SGSED 449
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.065
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLK 143
G + + H+ I + +S DGT+ TAS D A+++D S + LK
Sbjct: 170 GTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLK 216
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
+KGH ++S+ F+P G SG D VR+ N
Sbjct: 134 LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLF---DTNSLELLKEYKTERPVNSAAL 182
+ +K HT+ ++ + + GT+ ++ S D T +++ D L +L + P+ S ++
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH--SEPIISVSI 188
Query: 183 S 185
S
Sbjct: 189 S 189
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 32.7 bits (71), Expect = 0.065
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVRVHNF 412
IN+ AF D K +GGEDGY+R ++F
Sbjct: 121 INAFAFTSDLKWLFTGGEDGYIRKYDF 147
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.7 bits (71), Expect = 0.065
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRV 403
GH GP++SL+F+ G ASG D VR+
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRI 493
Score = 29.9 bits (64), Expect = 0.46
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
+ H+ +++L + DG+ +G +DG ++V + + + TF
Sbjct: 336 QSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTF 377
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 338 SLAFHPDGKSYASGGEDGYVRVHNFDQ 418
SLAFHPDGK DG + N +
Sbjct: 514 SLAFHPDGKEVCVASLDGQLTFWNVQE 540
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
GHF I S+++ D + + S +D R+H+ D
Sbjct: 144 GHFDDIVSISWSADSRFFISTSKDLTARLHSVD 176
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 32.7 bits (71), Expect = 0.065
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRV 403
GH G + L+ H G ASGG+DG +R+
Sbjct: 377 GHKGRVRCLSVHVSGNWLASGGDDGVLRI 405
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 257 GKFDAR--FFHLVFEEE-FGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
G +D R +F L F + + ++ H + +++HP + SG +DG V+V
Sbjct: 628 GSYDKRLCWFDLDFSSKPYKNLRYHSRALRDVSYHPSLPLFCSGSDDGDVQV 679
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNS 128
G IH H H+I D+ L D T F + D +++D N+
Sbjct: 46 GACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNT 87
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
R+ GH IN++ ++ D ASG D VR+
Sbjct: 93 RLGGHLAQINTIRYNEDSSILASGSFDSKVRL 124
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 287 VFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 418
+ +EE + +G + S+AF PDGK A+G ED +R+ + Q
Sbjct: 323 LLQEESSKREGDLY-VRSVAFSPDGKYLATGVEDQQIRIWDIAQ 365
Score = 29.1 bits (62), Expect = 0.80
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
++ GH + S+AF PDGK SG D +++
Sbjct: 453 QLHGHEESVYSVAFSPDGKYLVSGSLDNTIKL 484
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
++GH + S+A P+G +A+G D R+ +++
Sbjct: 550 LQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 272 RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGED 388
R + + + + + GH I SL F DGK+ SG D
Sbjct: 359 RIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGD 397
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 31.5 bits (68), Expect = 0.15
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY-KTERPVNSAALSPILDHVV 206
H I D+Q S G F TAS D TA+L+D L+ + + V+ + P ++
Sbjct: 444 HNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLA 503
Query: 207 LGGGQDA---MEVTTTSTRRV 260
G +V T T RV
Sbjct: 504 TGSSDHTTRMWDVRTGGTVRV 524
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 272 RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNF 412
+ F V E +F + + + PDGK A GG+D V +++F
Sbjct: 347 KLFDFVKEHVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSF 393
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 245 INQKGKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNF 412
+ Q+ K D +H+ +E++ G + INSL + D + SGG+DG RV +F
Sbjct: 556 VYQREKHDEALWHVAYEQDHAH--GVY-EINSLEYLRDDR-LLSGGDDGECRVWSF 607
Score = 29.1 bits (62), Expect = 0.80
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYV 397
+++GH + +LAF P+G + AS DG V
Sbjct: 462 QLQGHTNTVWALAFSPNGNTLASADNDGNV 491
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
+ GH G + S+A HP +A+ +D VR++N
Sbjct: 286 ISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYN 318
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 233 SDNHINQKGKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVR 400
S + G F AR + + +KGH ++ +A+ PD A+G D +R
Sbjct: 147 SSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIR 202
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRV 403
GH + ++ + PDG+ ASGG D VR+
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRI 499
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
++ GH +N +F PDG+ A+ D VR+
Sbjct: 384 KMHGHQKVVNHASFSPDGRCIATASFDSSVRL 415
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDY 433
+KGH + ++ F PD + S G D V +H ++ DY
Sbjct: 574 LKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDY 614
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+ GH + +A+ P+GK Y S G D R+
Sbjct: 366 ISGHTKSVKGVAWDPEGKFYLSAGTDQTTRL 396
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 9 KIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLF 116
++ S+ HT + + +G +++A D T +LF
Sbjct: 362 QLPSISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLF 397
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 30.3 bits (65), Expect = 0.35
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 424
K H + S+ F P G+ + SG D +R++N + +
Sbjct: 270 KDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGH 306
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 30.3 bits (65), Expect = 0.35
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 424
KGH GP+ +AF P G +A+ D ++ + D Y
Sbjct: 418 KGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIY 454
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
R+ H GP+ F PD K S ED R+ + D
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVD 409
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRV 403
GH P+ ++A PDG + AS +G + +
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHL 531
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVR 400
++GH G I SL+F + SGG D VR
Sbjct: 543 MRGHRGNIYSLSFSRESTVLVSGGSDCTVR 572
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 29.9 bits (64), Expect = 0.46
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 184 LRAAEFT-GLSVLYSLRSSNELVSNNLAV*SLEAVINIVPSRESCISVIWWVCSLTEW 14
L A E+ G S+RSS EL N V V + PSR+S WV ++ W
Sbjct: 15 LNAGEYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLW 72
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 29.9 bits (64), Expect = 0.46
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
++GH GP+NS+ D SG +D +++ + + + +TF
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF 430
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 29.9 bits (64), Expect = 0.46
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 27 EHTHQITDMQLSRDGTMFITASKDHTAKLFD 119
EH + + SRDGT + S D +AK+FD
Sbjct: 72 EHQGPVLSVNWSRDGTKVASGSVDKSAKVFD 102
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDG 391
+NS+AFHP ++++ G DG
Sbjct: 257 VNSIAFHPQYGTFSTAGSDG 276
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTE 158
H H I + + GT+ ++ S D + +++D SL L ++ T+
Sbjct: 100 HEHNIPCITFNSSGTLLLSGSIDRSLQIWDITSLSCLCKFYTK 142
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 27 EHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLE 134
+H +IT + +S DG +T DH + D+ +LE
Sbjct: 206 DHVKEITCLAISNDGRWIVTGGLDHRIVIRDSVTLE 241
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.61
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVR 400
G+ INS++F P + +G EDG R
Sbjct: 188 GNTSDINSISFFPSNADFVTGAEDGIAR 215
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 29.1 bits (62), Expect = 0.80
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVR 400
I SLA HPDG + +G E+G +R
Sbjct: 336 ITSLAVHPDGNLFVAGLENGELR 358
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 0.80
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 421
V+ H + +AF P+ + + +DG ++V NF S
Sbjct: 160 VQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMS 196
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 278 FHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVR 400
FH+ EE ++ GH + ++ +HP ASG +D V+
Sbjct: 193 FHMSTEEL--KLTGHGWDVKTVDWHPSKGLLASGSKDNLVK 231
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTE---RPVNSA 176
K+ K +T+ +++ S + + ++D + F+ E + EY TE P ++
Sbjct: 132 KRSRQKKSNTYVQDEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTR 191
Query: 177 ALSPILDHVVLGG 215
A+ +LDH ++ G
Sbjct: 192 AIDVVLDHRLIEG 204
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 9 KIHSVKEHTHQITDMQLSRDGTMFITASKD 98
K+ V +H+ +TDMQLS D ++ S D
Sbjct: 290 KLSQVYKHSLPVTDMQLSPDSEALVSVSAD 319
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+GH I S+A PDG +SGG D R+
Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRI 333
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGED 388
R++GH + +AFHP G S D
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFD 286
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 305 GRVKGHFGPINSLAFHPDGKSYASGGED 388
G GH PI +A PDGK +G +D
Sbjct: 362 GEYTGHQEPILCMAITPDGKRVVTGSDD 389
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 329 PINSLAFHPDGKSYASGGEDGYV 397
P+N L FHP ++ A+ G DG V
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVV 257
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 296 EEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
++ G+++GH I ++AF+P G S +G +++ + D
Sbjct: 220 DQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDID 259
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 302 FGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
F + GH P+ S+AF P A+ G+ + +++
Sbjct: 180 FHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYD 215
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGT-MFITASKDHTAKLFDTN 125
+ +++ K H +ITD D + +F+T D TA+++D N
Sbjct: 188 RNMYNTKGHIAEITDGCWQPDSSQIFLTTGYDSTARIWDVN 228
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHN 409
++ H I LA + + SGG DG+V+++N
Sbjct: 245 KLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYN 278
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 18 SVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNS 128
S K H ++ ++ GT FI+ D K+ DT++
Sbjct: 54 STKRHKKSCRNISVNESGTEFISVGSDGVLKIADTST 90
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 485 YETLEYCKLTT-PYCNRKCSQSKIDQSYEHEHNHLHLRKH 369
Y+ L+Y +L T + + K Q H+H H H + H
Sbjct: 693 YKDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSH 732
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 287 VFEEEFGRV----KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
+FE G++ +GH I ++ F+ + SGG DG VR+ NF+
Sbjct: 413 IFEASSGKLLRMLQGHEDLIRTVRFNDE--KIVSGGYDGTVRIWNFN 457
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSP 188
HT I + S +TAS+D L+D ++ + PV SA+L P
Sbjct: 65 HTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVYQVVLSAPVWSASLHP 117
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY 149
+ ++ HT+ ++ + I+ S+D T K++ T S L+K Y
Sbjct: 221 VRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSY 266
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRV-HNFDQSYF-DYTFDYNR 451
++GH ++ FH SG EDG V++ H S Y F +R
Sbjct: 224 LEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDR 272
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE*LICNTL 475
H + +L+ HPD ++ASG D ++ F + F F+ + I NTL
Sbjct: 330 HKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHN--AIVNTL 378
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVRV 403
IN + P G + +GG DG V+V
Sbjct: 549 INMAQWQPKGNLFVTGGSDGIVKV 572
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSY 424
H P+N L++ +G+ SGG++G + + + S+
Sbjct: 261 HANPLNGLSWALNGEYLLSGGQEGVLVLWQMETSH 295
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKD 98
G I+ + H +T ++ S DG + TAS D
Sbjct: 108 GALIYFFRAHYQPLTILKFSNDGMVLFTASND 139
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGED 388
+K H INSLAFHP A +D
Sbjct: 334 LKYHSDGINSLAFHPGSNVIALASKD 359
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 305 GRVKGHFGPINSLAFHPDGKSYASGGEDGYVR 400
G +KGH + LA P+G++ +G D +R
Sbjct: 498 GTLKGHTDRVLYLAMSPNGENIVTGAADETLR 529
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGED 388
GH G +N+L + DG+ SG +D
Sbjct: 43 GHTGCVNTLDWSADGEFLLSGSDD 66
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 263 FDARFFHLVFEEEFGRVKGHFGPINSL 343
FD R +EEF V +GPIN L
Sbjct: 628 FDTRSSEFSEKEEFSSVFDDYGPINDL 654
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYF 427
GH G L F DG+ S ED +R+ + + S F
Sbjct: 192 GHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPF 228
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 25.4 bits (53), Expect = 9.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 189 ILDHVVLGGGQDAMEVTTTSTRRVNSMLVSST*CLKR 299
ILDH + G +D V T RR++++ ++ +R
Sbjct: 614 ILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFER 650
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,460,620
Number of Sequences: 5004
Number of extensions: 72642
Number of successful extensions: 365
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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