Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120245.Seq
(827 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07) 131 8e-31
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11) 42 5e-04
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 40 0.003
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 39 0.004
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 39 0.006
SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21) 39 0.006
SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_38974| Best HMM Match : WD40 (HMM E-Value=1.1e-19) 38 0.013
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 36 0.040
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 36 0.053
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 35 0.070
SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22) 35 0.070
SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 34 0.12
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 34 0.12
SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13) 34 0.12
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_30492| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 33 0.21
SB_1661| Best HMM Match : WD40 (HMM E-Value=5e-13) 33 0.21
SB_46905| Best HMM Match : WD40 (HMM E-Value=8.9e-12) 33 0.28
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 33 0.37
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 32 0.49
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 32 0.49
SB_32323| Best HMM Match : WD40 (HMM E-Value=0) 32 0.65
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 31 0.86
SB_42895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 31 0.86
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 31 0.86
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_56394| Best HMM Match : WD40 (HMM E-Value=6.2e-10) 31 1.5
SB_7596| Best HMM Match : WD40 (HMM E-Value=7.1e-15) 31 1.5
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 31 1.5
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 30 2.6
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 29 4.6
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 29 4.6
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 29 6.1
SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 29 6.1
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93) 28 8.0
SB_34753| Best HMM Match : WD40 (HMM E-Value=5.3e-20) 28 8.0
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_51840| Best HMM Match : WD40 (HMM E-Value=8.3e-07)
Length = 242
Score = 131 bits (316), Expect = 8e-31
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAAL 182
G K+ SV+EH+ QI D+Q+ +D TMF+TASKD TAKLFDT+SL LK YKT+RPVNSAAL
Sbjct: 44 GNKLISVQEHSKQINDIQMYKDSTMFVTASKDTTAKLFDTDSLRHLKTYKTDRPVNSAAL 103
Query: 183 SPILDHVVLGGGQDAMEVTTTSTR 254
SPI DHVV+GGGQ+AMEVTTTSTR
Sbjct: 104 SPIKDHVVVGGGQEAMEVTTTSTR 127
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 257 GKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPDGK 364
GKFDARFFH+VFEEE GRVKGHFGPINSLAFHPDG+
Sbjct: 129 GKFDARFFHVVFEEEIGRVKGHFGPINSLAFHPDGR 164
>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
Length = 256
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 418
V+GH I++++F PDG ASGG DG VRV +F Q
Sbjct: 177 VRGHTDTIHTMSFSPDGTLLASGGMDGAVRVWDFGQ 212
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
+KGH +N L F PDG+ SGGEDG +V+ ++
Sbjct: 176 LKGHTDCVNHLRFSPDGRWIISGGEDGAAKVYGWE 210
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVH 406
GH I SL FHP G ASG D ++ H
Sbjct: 150 GHKSSIRSLDFHPFGDFVASGSLDTNLKGH 179
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAAL 182
GK + + HTH + ++L R M +++S+D T K++D + ++ + + V + +
Sbjct: 791 GKLVKDLNAHTHAVMRIELLRAHNMLVSSSRDGTVKVWDVANAHVIDSFDFQSQVRNFDV 850
Query: 183 SPILDHVVL 209
P D VL
Sbjct: 851 MPHEDGYVL 859
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 18 SVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNS 128
++K HT I + +SRD ++ ++ASKD K++ T S
Sbjct: 457 TLKGHTSLIWAIAVSRDDSVIVSASKDDLLKVWRTES 493
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
+KGH G I LA DGK SG +D ++V
Sbjct: 416 LKGHGGLIKCLAAMHDGKRIVSGAKDNNIKV 446
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTF 439
+GH+ +N LA+ PDG A+GG+DG V++ N + TF
Sbjct: 1248 QGHYYDMNVLAYSPDGNYIATGGDDGKVKLWNTMTGFCFVTF 1289
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 421
GH P++SLAF P SG D VR+ N +S
Sbjct: 1377 GHEAPVSSLAFSPSHPVLISGAWDKTVRLWNVFES 1411
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 18 SVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERP-VNSAALSPIL 194
S++ HT + D+ L R+G ++AS D T K++D + +T + V + A +
Sbjct: 71 SLEHHTDWVNDIVLCRNGKTILSASSDTTVKVWDATRGFCMSTLRTHKDYVQALAYASCK 130
Query: 195 DHVVLGG 215
+HV GG
Sbjct: 131 EHVASGG 137
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 296 EEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 418
E+ ++KGH + ++ DG+ SG DG VR+ + Q
Sbjct: 202 EKVMKLKGHMDNVKAVVIDSDGQQCLSGSSDGTVRLWSLGQ 242
>SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21)
Length = 759
Score = 38.7 bits (86), Expect = 0.006
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILD--HV 203
H+ + D+ + DGT F++A D KL+DT + E L Y ++ +P D H+
Sbjct: 132 HSKAVRDVSFNNDGTQFLSAGYDRYVKLWDTETGECLGRYTNKKIPYCVKFNPDEDKQHL 191
Query: 204 VLGGGQD-----AMEVTTTSTR-RVNSMLVSST*CLKRSLAE 311
+ G D VT +ST R+ +S+ L RS +
Sbjct: 192 FVCGTSDKKILTVNRVTYSSTSDRIPEFSYASSLLLNRSTCD 233
>SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 218 SRCYGSDNHINQKGKFDA--RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDG 391
S Y D H G D F L + ++GH PI SL F PD + + +DG
Sbjct: 111 SLAYSPDGHYIACGAIDGIINIFDLTTNKLLHTLEGHAMPIRSLTFSPDSQLLITASDDG 170
Query: 392 YVRVHN 409
++++++
Sbjct: 171 HIKMYD 176
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE 454
KGH I +LA DGK ASGG+D +R+ + D S +TF +R+
Sbjct: 111 KGHKEQILALAITTDGKYLASGGKDKLIRIWDPDTSKHIHTFKGHRD 157
>SB_38974| Best HMM Match : WD40 (HMM E-Value=1.1e-19)
Length = 584
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 272 RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 418
R F + +G +K +FG + + + PDGK +GGED + V +F +
Sbjct: 299 RVFDFDAQTLYGVMKSYFGGLTCVCWSPDGKYVVTGGEDDLITVWSFHE 347
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 326 GPINSLAFHPDGKSYASGGEDGYVRVHNFD 415
G IN +F PD K A +DGY+RV +FD
Sbjct: 275 GGINEFSFSPDCKHIALVTQDGYLRVFDFD 304
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERP-VNSAA 179
GK+++ + +HT + + LS ++ + DHT K++D ++L L+ K + V+
Sbjct: 738 GKELNKLLDHTKLVYTLALSPHADFLVSGAFDHTVKIWDMDTLSLVHTLKGHKNWVSGVL 797
Query: 180 LSPILDHVVLGGGQDAMEVTTTST-RRVNSM 269
++P ++ +++ T VNS+
Sbjct: 798 VTPDSKRIISSSYDKTVKIWDVETCAFVNSL 828
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 224 CYGSDNHINQKGKFDA--RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYV 397
C D+ G D + + L +E + GH I ++A PDG S G+D V
Sbjct: 881 CCSPDDKFAISGSEDTMVKIWDLESAKEVRSLVGHTSDIFAVAVTPDGSKVISSGDDTQV 940
Query: 398 RVHNFD 415
+V + +
Sbjct: 941 KVWSLE 946
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 21 VKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKE 146
++ HT + + +RDG++F T SKD +L D S +++KE
Sbjct: 104 IENHTAIVYSVSWNRDGSLFTTTSKDKKLRLVDPRSGKIVKE 145
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 35.5 bits (78), Expect = 0.053
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 9 KIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSP 188
KI ++ HT + + D +TAS D T +L+D +S LK Y + ++
Sbjct: 31 KIKVMRGHTDSVNSCRFCFDDAKIVTASHDKTIRLWDASSGNQLKVYTGHTSIITSCHPN 90
Query: 189 ILDHVVLGGGQD 224
++ GG D
Sbjct: 91 TTSRKLISGGWD 102
>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 515
Score = 35.1 bits (77), Expect = 0.070
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 30 HTHQITDMQL--SRDGTMFITASKDHTAKLFDTNSLELLKEYK 152
H H+ T M + +++G +TAS+DH KLFD +++ L+ ++
Sbjct: 2 HLHKSTVMSIKWNQNGNWLLTASRDHLLKLFDIRAMKELQAFR 44
>SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22)
Length = 834
Score = 35.1 bits (77), Expect = 0.070
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = +3
Query: 6 KKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALS 185
K + + H + S+DG TASKD + + D NS + K L
Sbjct: 81 KMLMELNHHKKPCRALAFSKDGLHLFTASKDKSLQAIDMNSGSIAHAIKKAHSCPVNCLK 140
Query: 186 PILDHVVLGGGQDAMEVTTTSTRRV 260
I DH+V G D V +R V
Sbjct: 141 VISDHLV-ATGDDEGSVKVWDSRTV 164
>SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTER---PVNSAAL 182
I ++ +H ++T ++ + I+ SKD T KLFD + + K YK + PV+
Sbjct: 19 IRTLYDHAEEVTALEFHPCAPVLISGSKDCTVKLFDISKPSVKKAYKAVQNTPPVSGHIQ 78
Query: 183 S--PILDHV 203
+ P++ H+
Sbjct: 79 NTPPVIGHI 87
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 42 ITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPILDHV---VLG 212
+T + ++DG + +S D+T +L D ++ ELL E+K + L L+H V+
Sbjct: 741 VTSVTFTQDGQCILVSSLDNTVRLMDKDTGELLNEFKGHQN-KEYKLDSCLNHTDTHVIS 799
Query: 213 GGQD 224
G +D
Sbjct: 800 GSED 803
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 75 MFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSP 188
+F+TAS D T +L+D S ++K+ T+ SAA SP
Sbjct: 1169 VFVTASDDRTIRLWDIPSKGMVKKTSTDVAARSAAFSP 1206
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 18 SVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTER 161
S++ H + MQ G F+T KD L+D N LK+YK +
Sbjct: 650 SIQAHEGPVFAMQTLEKG--FVTGGKDGMVSLWDENMSRCLKQYKVTK 695
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 30 HTHQITDMQ-LSRDGTMFITASKDHTAKLFDTNSLELLKEYKTE 158
H I +Q D MF+T+S D T K++DTN+L++++ + E
Sbjct: 98 HRSSIETVQWYPHDSGMFLTSSVDRTLKVWDTNALQVVETFNFE 141
>SB_22042| Best HMM Match : WD40 (HMM E-Value=6.1e-13)
Length = 232
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 21 VKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTN 125
V+ H+ I + + DGT +T SKDHT +++D +
Sbjct: 172 VEGHSKMILCLDVCADGTKIVTGSKDHTVRVWDVS 206
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFIT----ASKDHTAKLFDTNSLELLKEYKTERPVN 170
G+ H + HT I + LSRDG ++ ++D + L+D + + + + PV+
Sbjct: 1498 GEFKHQLGGHTEPIKGLSLSRDGRRLLSYVPMGTRDRSVCLWDVITGCPIASFTPDLPVS 1557
Query: 171 SAALSPILDHVVLGGGQDAMEVTTTSTRRVNSMLVS 278
S LS D VV+ + V+ T V S +S
Sbjct: 1558 SCVLSDDGDQVVMVINKSRPIVSLVLTHEVGSRELS 1593
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 21 VKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLK 143
++ HT + + +RDG++F T SKD +L D S +++K
Sbjct: 168 IENHTAIVYSVSWNRDGSLFTTTSKDKKLRLVDPRSGKIVK 208
>SB_30492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 33.5 bits (73), Expect = 0.21
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 329 PINSLAFHPDGKSYASGGEDGYVRV 403
P+N++AFH ++A+GG DG+V +
Sbjct: 188 PVNAIAFHNMHNTFATGGSDGFVNI 212
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFDYNRE 454
++GH I+ + FHP+ +G EDG VRV + + + T +Y E
Sbjct: 123 LEGHAQNISCVGFHPELPIILTGSEDGTVRVWHANTYRLESTLNYGLE 170
>SB_1661| Best HMM Match : WD40 (HMM E-Value=5e-13)
Length = 106
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNS 128
G +I ++ H+ +I + GT +T S DHT ++DT S
Sbjct: 13 GAEISTLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRS 54
>SB_46905| Best HMM Match : WD40 (HMM E-Value=8.9e-12)
Length = 340
Score = 33.1 bits (72), Expect = 0.28
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLK 143
H+ Q+T + ++ DGT+ ++ S D+TA+++ S + ++
Sbjct: 172 HSKQVTSLAVTMDGTVLLSGSNDNTARVWHIQSRQSIR 209
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 421
GH +N+LA +P G SG D +RV + D S
Sbjct: 223 GHLKAVNTLAIYPFGSYIMSGSSDNTIRVWSLDMS 257
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYTFD 442
H + SLA HPDG++ ASG G+ V D + + D
Sbjct: 175 HTDDVKSLAVHPDGRTIASGQVAGHEEVQGEDHGRYIVSVD 215
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 326 GPINSLAFHPDGKSYASGGEDGYVRVHN 409
GP+ +L P+G + GG+DG VR N
Sbjct: 286 GPVYALLVLPNGDLLSGGGKDGTVRAWN 313
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRVHNF--DQSYFDYTFD 442
GH IN++AF P G ++ +G +D R+ + DQ Y+ D
Sbjct: 153 GHESDINAVAFFPSGFAFGTGSDDATCRLFDIRADQELMMYSHD 196
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTN 125
G + +K HT + + SRDGT+ +A D+ KL++T+
Sbjct: 301 GTLVAELKGHTDTVYSLCFSRDGTILASAGLDNCIKLWNTS 341
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 317 GHFGPINSLAFHPDGKSYASGGEDGYVRV 403
GH +N +AFHP+ A+G D VR+
Sbjct: 165 GHVSDVNKVAFHPNCNYIATGSSDRTVRL 193
>SB_32323| Best HMM Match : WD40 (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQ 418
R H GP+ + FH + SGG+D ++V N+ Q
Sbjct: 46 RFDEHDGPVRGINFHTVQPLFVSGGDDYKIKVWNYKQ 82
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 314 KGHFGPINSLAFHPDGKSYASGGEDGYVRVHNF 412
+ H P+ L+F P YAS +DG V++ +F
Sbjct: 110 EAHKEPVRGLSFSPTDNKYASCADDGLVKIWDF 142
>SB_42895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +3
Query: 48 DMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERP-VNSAALSPI-LDHVVLGGGQ 221
D+ S DG TAS D T L+D + +K K VNS S + +VV G
Sbjct: 2 DVHFSTDGNTMFTASTDKTVALWDYETGARMKRLKGHTSFVNSCCPSRRGMQYVVSGSDD 61
Query: 222 DAMEVTTTSTRRVNSMLVS 278
++VT + + + S
Sbjct: 62 STIKVTAVAFSDASDQIFS 80
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 30 HTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKE 146
H+ + D+ S DG + + S+D T +++D + E LK+
Sbjct: 1457 HSDWVMDVAFSSDGALLTSGSRDRTVRVWDCAAAEKLKK 1495
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 296 EEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYF 427
E R+ GH IN + F PDG+ AS D V++ N + F
Sbjct: 50 EPLVRMTGHQALINQVCFSPDGRLIASAAFDKSVKLWNGETGKF 93
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 21 VKEHTHQITDMQLSRDGTMFITASKDHTAKLFD-TNSLELLKE 146
+ EHT ++ + S +G MF ++SKD A L+D T +L+E
Sbjct: 111 LNEHTDEVLHVAFSHNGKMFASSSKDCHAILWDVTGDSVILRE 153
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 326 GPINSLAFHPDGKSYASGGEDGYVRV 403
G +NS+ FHP G A+GG D V++
Sbjct: 113 GFVNSVEFHPSGTCIAAGGTDSTVKI 138
>SB_56394| Best HMM Match : WD40 (HMM E-Value=6.2e-10)
Length = 183
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 308 RVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
++ GH +N F P G+ ASGG D +++
Sbjct: 35 QLSGHIADVNCCRFFPSGEVIASGGADFQIKI 66
>SB_7596| Best HMM Match : WD40 (HMM E-Value=7.1e-15)
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 311 VKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQS 421
+KG + +A PD KS A+GG V V FD +
Sbjct: 61 LKGSKSEVTGMAISPDNKSLAAGGHRSAVSVLKFDHT 97
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 287 VFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
V + G + H + L + PDGK ASGG D V +
Sbjct: 459 VANHKIGTLLNHSQEVCGLKWSPDGKLLASGGNDNVVNI 497
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 24 KEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERP-VNSAALSPILDH 200
+ H+ +T + SRD + ++ S D T ++ S + LKE++ VN + H
Sbjct: 304 RAHSKGVTCVTFSRDASQLLSGSFDMTIRMHGLKSGKTLKEFRGHTSFVNDVIFTADAHH 363
Query: 201 VVLGGGQDAMEV 236
++ +++
Sbjct: 364 IISASSDGTIKI 375
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 344 AFHPDGKSYASGGEDGYVRVHNF 412
AF PDG+ +G DG++ V NF
Sbjct: 221 AFSPDGQYLVTGSVDGFIEVWNF 243
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +2
Query: 257 GKFDA--RFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFD 430
G FD R L + +GH +N + F D S DG +++ N +
Sbjct: 325 GSFDMTIRMHGLKSGKTLKEFRGHTSFVNDVIFTADAHHIISASSDGTIKIWNIKSTECQ 384
Query: 431 YTF 439
+TF
Sbjct: 385 HTF 387
>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 42 ITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEY 149
+ D S D +TAS D+ A+L++ + E+++EY
Sbjct: 244 VWDCAFSEDSQYLVTASSDNLARLWNVEAGEVVREY 279
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 338 SLAFHPDGKSYASGGEDGYVRVHNFD 415
++AFHP S+A G DG VRV + +
Sbjct: 15 NIAFHPTNNSFACGFTDGTVRVFDIE 40
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 3 GKKIHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLF 116
GK + H+ +T + + RDG +T S+D T +L+
Sbjct: 1806 GKLQSRITAHSDTVTCLSIDRDGHHLMTGSRDTTCRLW 1843
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 290 FEEEFGRVKGHFGPINSLAFHPDGKSYASGGEDGYVRV 403
F E +KGH G + + + P GK AS +D +RV
Sbjct: 120 FPEVIQIIKGHTGLVKGVTWDPVGKYLASQSDDKTLRV 157
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 668 FRISHNLSVHPHLSHISESIER 733
FR+ HNL+V H+ H+ ES+ +
Sbjct: 800 FRLEHNLAVSNHVFHLRESVHQ 821
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +3
Query: 12 IHSVKEHTHQITDMQLSRDGTMFITASKDHTAKLFDTNSLELLKEYKTERPVNSAALSPI 191
+ + HT + + +S DGT T D+T + +D L+++ + S P
Sbjct: 462 VRQFQGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPS 521
Query: 192 LDHVVLGGGQDAMEV 236
D + +G +EV
Sbjct: 522 GDWLAVGMENSNVEV 536
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 326 GPINSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 436
G +N + PDG ASGG+DG + + + YT
Sbjct: 202 GYLNCVTVSPDGSLCASGGKDGQAMLWDLNDGKHLYT 238
>SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3824
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = -2
Query: 418 LIKVMNTNITIFTSGSIGLSIWMESQ----TVDRTKVTFHSAKLLFKH*VEETSIEFTLL 251
++KV T++ T+G + SIW ++ T+D T +AKLL + ET+ F L+
Sbjct: 2267 VVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDR----ETTASFDLV 2322
Query: 250 V 248
+
Sbjct: 2323 I 2323
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVRVHNFDQSYFDYT 436
I+S+ F P G++ A G E G + V N ++ YT
Sbjct: 845 IHSVTFSPRGEAIAVGCESGTISVFNLQEARVMYT 879
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSY-ASGGEDGYVRV 403
H GP+ +L +HP+ +++ A+GG D V+V
Sbjct: 420 HNGPVFTLDWHPEDRNWIATGGRDKCVKV 448
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 341 LAFHPDGKSYASGGEDGYVR 400
L FH GK Y SGG DG VR
Sbjct: 560 LDFHFSGKIYVSGGFDGTVR 579
>SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93)
Length = 524
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 446 CNRKCSQSKIDQSYEHEHNHLHLRKHRTFHLDGKPNC 336
CNR S SK + + N + T HLDG NC
Sbjct: 267 CNRYESLSKASEECKEWVNSEQFKLWETSHLDGSANC 303
>SB_34753| Best HMM Match : WD40 (HMM E-Value=5.3e-20)
Length = 645
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 332 INSLAFHPDGKSYASGGEDGYVRVH 406
I+ + F PDGK A G D YV ++
Sbjct: 231 ISDIKFSPDGKFLAVGSHDNYVDIY 255
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 320 HFGPINSLAFHPDGKSYASGGEDGYVRV 403
H P+ +++F PDG+ ASG D V +
Sbjct: 332 HHEPVYTISFSPDGRYLASGSFDKRVHI 359
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,564,787
Number of Sequences: 59808
Number of extensions: 499259
Number of successful extensions: 1540
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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