Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120243.Seq
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.18 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.98 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 410 NPFSLFRAFVESPRVVVNKFNLI 478
           NP+  F A V+ PR+VV+ FN++
Sbjct: 28  NPYQFFLA-VQYPRIVVSTFNIV 49


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 317 LNSCFISFSSSVWCTVGSVCS 255
           ++SC   FSSS WC   +  S
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSS 155


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 219 FRVASRRVKFVVWPILNK 166
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 219 FRVASRRVKFVVWPILNK 166
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 219 FRVASRRVKFVVWPILNK 166
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 219 FRVASRRVKFVVWPILNK 166
           F +A++   FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 114 PSRAISMRPRRCCTPKGICS 173
           P+RA+   P +C  P   CS
Sbjct: 149 PNRALDCDPTQCVLPDCFCS 168


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = -3

Query: 742 LWVQIQRVALLCHAIWSMVLDLVGMLKRRFVLAVDVDTYCPFTIYIF 602
           LWV I     LC  I   V D++    +      D+ TY    + IF
Sbjct: 161 LWVGILSTIFLCDTILKKVDDILSQAYKLEASFDDLATYETDEVQIF 207


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +3

Query: 543 TCSVMSSQSDLWPR-TSP 593
           TCS++   + LWP+ T P
Sbjct: 81  TCSMLCGSTQLWPQPTGP 98


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 722  PLYLHPQTVLITKSAGFN 775
            PLY HP+  ++  +A F+
Sbjct: 1605 PLYYHPEDEVVFYNANFS 1622


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,286
Number of Sequences: 336
Number of extensions: 4039
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)