Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120242.Seq
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   1.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   1.1  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    26   1.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.5  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   3.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.8  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   7.8  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 440 AGRFKGLQKSNMVNMPEQQSSTE-LRPCAKMKSC 538
           A   K +   ++ N P+QQS+T  LR C    +C
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNKSTC 151


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 440 AGRFKGLQKSNMVNMPEQQSSTE-LRPCAKMKSC 538
           A   K +   ++ N P+QQS+T  LR C    +C
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNKSTC 152


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 558 LLQQIQHGPANCYCKFLGKKEH*LYPQRNACHAGR 662
           LL+Q+ HG  +  C  + +K     P R AC  G+
Sbjct: 170 LLRQLNHGGDHAECGQVERKSQPFGPARWACKLGK 204


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 472  HGKHAGATIFYRTAAVCKNEKLLNKLESSSYNKSNMDQLIA---IVNFLEKKNTNYIL 636
            H K  G  +FYR A + KNE+  +KL  +  + S+ D+      +   LE ++ +Y L
Sbjct: 1061 HSKF-GVRLFYRNADIDKNER--DKLFDAFISYSSKDEAFVAEELAPMLENEDPSYKL 1115


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 759 GPLGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVED 631
           G  G + +S P+  + VFI +N + L  G   F +H++  + D
Sbjct: 32  GVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTD 74


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 139 TMPPKNCTHLGG 174
           TMPPK C+H  G
Sbjct: 556 TMPPKGCSHDDG 567


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 355 NVLSVRCVFITNELPGCWALKKYIIKN 435
           +V +VRC      +P   A+KK++I+N
Sbjct: 16  HVKAVRCTNCARCVPKDKAIKKFVIRN 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,634
Number of Sequences: 2352
Number of extensions: 17198
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)