Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120241.Seq
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 56 5e-09
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 56 5e-09
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 56 5e-09
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 56 5e-09
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 56 5e-09
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 56 5e-09
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 56 5e-09
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 56 5e-09
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 56 5e-09
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 56 5e-09
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 56 5e-09
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 29 0.89
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 27 3.6
SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces pombe... 26 4.8
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 26 6.3
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 25 8.3
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 25 8.3
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 56.0 bits (129), Expect = 5e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLP 208
I ++ WKGI+ ++ Y++NC CQ NK+ P+Q S P++ +S+D + LP
Sbjct: 937 ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996
Query: 209 ESGTAKLXYVM 241
ES +V+
Sbjct: 997 ESSGYNALFVV 1007
Score = 44.4 bits (100), Expect = 2e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 RLTKYSAAYPL-RSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKI 426
R +K + P +S++AE+T I+ FG P I D FTS +K
Sbjct: 1010 RFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNF 1069
Query: 427 KNLWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPD 546
+S PY PQ+ G ER++ T+++ L + +T T D
Sbjct: 1070 VMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVD 1109
Score = 31.9 bits (69), Expect = 0.096
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 495 QRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELL 620
+++ + + + + W ++ SYN AIHS T +P+E++
Sbjct: 1093 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1134
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 28.7 bits (61), Expect = 0.89
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 83 KNCTLCQENKAL-RRCNRAPMQITTTSTSPFQRVSLDIVGP 202
KN L +ENK L +R + I + T+P Q SL ++GP
Sbjct: 498 KNKKLIEENKILQKRLSEYTSVIQASLTAPSQPASLSLLGP 538
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 513 FVNDNQDDWPRYVYTAMLSYNTAIH 587
+ NDN DD RY + +L+ T+ H
Sbjct: 64 YYNDNVDDLKRYTFMGLLTLPTSEH 88
>SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 369 PRH*LHFRPFQKHLFLPENKKPLVDAIPSPISRSFR 476
P H HF Q+ F PE PL + P S SFR
Sbjct: 50 PSHLSHFGSSQQRRFAPEVSSPLAE--PYESSSSFR 83
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 382 FTSDLFKSTCSFLKIKNLWSTPYH---PQSQGALERSHSTLKE 501
F + + KS L K WS YH P+ Q L R++ L++
Sbjct: 451 FVNGVHKSVVKHLDEKETWSIKYHFRKPRDQDNLLRNYIRLRD 493
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 23 SRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSP 169
SRI++ Y I ++ E Y+KN Q AL +R +I +T+ P
Sbjct: 97 SRIRQAYEGLSILNEAEVYLKN---KQAGLALNALDRLQRRIDSTTQPP 142
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 322 IHFIS--LFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQGALERSHSTL 495
+HF+ LF P + T + N T + FLK +W YH +G L++ + +
Sbjct: 1 MHFLKQYLFYSPRRMKTQEIKNVTLE----DVDFLKNLGVWVEIYHHLEKGLLQQCFNLV 56
Query: 496 KEYLNHL 516
K+ + L
Sbjct: 57 KKNMEAL 63
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,143,120
Number of Sequences: 5004
Number of extensions: 69195
Number of successful extensions: 229
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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