Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120241.Seq
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     36   0.001
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.34 
AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    27   0.45 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.4  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   4.2  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.2  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   9.6  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 35.9 bits (79), Expect = 0.001
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
 Frame = +1

Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISL----FGI-PNTIFTDQGTNFTSDLFKSTCSFLK 423
           ++Y+  Y L+  S  E  D +  ++ L    FG  P  I +DQG  +++   +  C+   
Sbjct: 369 SRYTFVYFLKKKS--EAEDKIHEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEG 426

Query: 424 IKNLWSTPYHPQSQGALERSHSTLKE 501
           IK  ++  Y PQ  G  ER + +L E
Sbjct: 427 IKMEFTAAYSPQQNGVAERKNRSLTE 452



 Score = 27.9 bits (59), Expect = 0.34
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +2

Query: 89  CTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLPESGTAKLXYVMTLQD 253
           C  C E K  R  +  P     TST     +  D+ GP+ E+      Y MTL D
Sbjct: 314 CECCIECKMAR--SPFPPVAGKTSTEVLDIIHSDVCGPMEETTLGGCRYYMTLID 366


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +3

Query: 537  WPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYKQDLTTYPDYVR 692
            W   V   + +++   H   NF   ++L GH  F  D + +   T  PD +R
Sbjct: 917  WTHRVIPDIAAWHFRRHGEVNFHLSQVLSGH-GFFRDDLCRMGFTPSPDCIR 967


>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 402 FEKV*SEVSALVSEDSIRYSEKGYEV 325
           FE +  E SA V +D I Y +KGYE+
Sbjct: 119 FEPILYEGSAEVPQDKIDYMKKGYEL 144


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
 Frame = +2

Query: 95  LCQENKALRRCNRAPMQ----ITTT---STSPFQRVSLDIVGPLPESGTAKLXYVMTLQD 253
           LC E   L RC RA ++    IT+    ST P + + L+ + P P + T  L  ++  Q 
Sbjct: 204 LCWELHYLERCLRARIETASDITSVLRFSTKPTELI-LECIPPKPSNLTQLLRMLIQRQI 262

Query: 254 ALLNIQQLTHCVVYQL 301
           A L   +     VY L
Sbjct: 263 AFLKQHRYEPLAVYGL 278


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/71 (18%), Positives = 28/71 (39%)
 Frame = +3

Query: 426  KKPLVDAIPSPISRSFREKPFHTQRVPKSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFS 605
            ++ +   + S ++R   E+P+  +   + +       W R +   +  + T  H    F 
Sbjct: 835  QRSITTGVSSKLAR-IAERPYSVEAWQREWSTTTSGSWTRRLIPNIQPWITRRHGNIEFH 893

Query: 606  PYELLFGHKAF 638
              + L GH  F
Sbjct: 894  MSQFLSGHGFF 904


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 412 SFLKIKNLWSTPYHPQS 462
           S L  K LWS P+ PQ+
Sbjct: 268 SALYFKGLWSEPFEPQA 284


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 14  RMLSRIKEKYYWKGIKSDVENYI 82
           R +  ++ K+YW   ++ VE+YI
Sbjct: 165 RFVQHLEVKFYWLENRTSVEDYI 187


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 285 QWVSC*IFSKASWSVMTXLSFAVP-DSGKGPTISSETLW 172
           QW SC IFS    +    +   VP  + KG T   E +W
Sbjct: 74  QWSSCNIFSTQDHAAAAMVKAGVPVYAWKGET-DEEYMW 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,591
Number of Sequences: 2352
Number of extensions: 16390
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)