Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120241.Seq
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein. 52 2e-06
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 47 6e-05
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 47 6e-05
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 46 1e-04
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 46 1e-04
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 46 1e-04
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 46 1e-04
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 46 1e-04
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 46 1e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 46 1e-04
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 46 1e-04
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 46 1e-04
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 46 1e-04
AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens ... 44 7e-04
BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein. 43 0.001
AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 42 0.003
AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens ... 38 0.028
U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein. 37 0.085
BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB dom... 37 0.085
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 36 0.15
D86964-1|BAA13200.1| 1842|Homo sapiens KIAA0209 protein. 31 4.2
BC113457-1|AAI13458.1| 1830|Homo sapiens dedicator of cytokinesi... 31 4.2
BC104900-1|AAI04901.1| 1830|Homo sapiens dedicator of cytokinesi... 31 4.2
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 31 4.2
AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens ... 31 5.6
>AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein.
Length = 505
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 AYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPY 450
A+P R A+E T L+ I FG+P T+ +D G F +++ + LKIK Y
Sbjct: 309 AFPTRIEKAQEVTRLLLKDIIPRFGLPLTLGSDNGPAFMAEVVQQLSQLLKIKWKLHIVY 368
Query: 451 HPQSQGALERSHSTLKEYL 507
HPQS G ++ + TLK L
Sbjct: 369 HPQSSGKVQWMNQTLKHLL 387
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 47.2 bits (107), Expect = 6e-05
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
TK+ PLR+ A E L+ ++ G P+ + +D G FT+ + +
Sbjct: 236 TKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIV 295
Query: 439 STPYHP-QSQGALERSHSTLKEYLN 510
S YHP QSQG+LE + +K ++
Sbjct: 296 SGKYHPGQSQGSLEGASRDVKNMIS 320
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 47.2 bits (107), Expect = 6e-05
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
TK+ PLR+ A E L+ ++ G P+ + +D G FT+ + +
Sbjct: 289 TKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIV 348
Query: 439 STPYHP-QSQGALERSHSTLKEYLN 510
S YHP QSQG+LE + +K ++
Sbjct: 349 SGKYHPGQSQGSLEGASRDVKNMIS 373
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 585 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 644
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 645 AIVERTNRTLKTQL 658
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 546 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 605
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 606 AIVERTNRTLKTQL 619
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 573 TGESTSHVKKHLLSCFAVMGVPKKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 632
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 633 AIVERTNRTLKTQL 646
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 683 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 742
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 743 AIVERTNRTLKTQL 756
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 683 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 742
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 743 AIVERTNRTLKTQL 756
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 1606 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 1665
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 1666 AIVERTNRTLKTQL 1679
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 1608 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 1667
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 1668 AIVERTNRTLKTQL 1681
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 1606 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 1665
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 1666 AIVERTNRTLKTQL 1679
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 683 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 742
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 743 AIVERTNRTLKTQL 756
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 295 SAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQ 465
+ E T+ H +S F G+P I TD G + S F+ S KI + PY+ Q Q
Sbjct: 683 TGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQ 742
Query: 466 GALERSHSTLKEYL 507
+ER++ TLK L
Sbjct: 743 AIVERTNRTLKTQL 756
>AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ16337 fis, clone TESTI1000266. ).
Length = 153
Score = 43.6 bits (98), Expect = 7e-04
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +1
Query: 271 AAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPY 450
+A L S T L+ + G P I T+ + S F+ C I++ PY
Sbjct: 48 SANALPGESTGYVTKHLLLTFAFMGQPTKIKTNNDLAYASSQFQQFCHMWNIQHSTGIPY 107
Query: 451 HPQSQGALERSHSTLKEYL 507
+PQ Q +E +HSTLK L
Sbjct: 108 NPQGQAIVECAHSTLKNML 126
>AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ33142 fis, clone UTERU1000192. ).
Length = 120
Score = 43.6 bits (98), Expect = 7e-04
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 AYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPY 450
AYP + A E T L+ I FG+P I +D G F +DL + L I Y
Sbjct: 23 AYPTLTEKAREVTCVLLRDLIPRFGLPLRISSDNGLTFVADLVQKIAKVLGIIWKLHAAY 82
Query: 451 HPQSQGALERSHSTLKEYL 507
PQS E+ + T+K L
Sbjct: 83 RPQSSRKAEQMNQTIKNSL 101
>BC015325-1|AAH15325.1| 222|Homo sapiens ZH2C2 protein protein.
Length = 222
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +2
Query: 5 GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
G +R L+ ++ YYW + +DV+ ++ C CQ K AP Q +P+ V+
Sbjct: 87 GISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAK--NTVIVAPKQHLLKVENPWSLVT 144
Query: 185 LDIVGPLPESGTAKLXYVMTLQD 253
+D++GP S + + Y + + D
Sbjct: 145 VDLMGPFHTSNRSHV-YAIIMTD 166
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC 411
TK+ PL VSA E + +I+ L+G P I DQ F +C
Sbjct: 169 TKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQKVFISC 219
>AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ20125 fis, clone COL06152. ).
Length = 392
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +2
Query: 5 GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
G +R L+ ++ YYW + +D + ++ C CQ K AP Q +P+ V+
Sbjct: 87 GISRTLTLVESNYYWTSVTNDAKQWVYACQHCQVAK--NTVIVAPKQHLLKVENPWSLVT 144
Query: 185 LDIVGPLPESGTAKLXYVMTLQD 253
+D++GP S + + Y + + D
Sbjct: 145 VDLMGPFHTSNRSHV-YAIIMTD 166
Score = 34.7 bits (76), Expect = 0.34
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +1
Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
TK+ PL VSA E + +I+ L+G P I DQ F + IK +
Sbjct: 169 TKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQI- 227
Query: 439 STPYHPQSQGALERSHSTLKEYLN 510
+ + +E + +T+K +L+
Sbjct: 228 VISHTSGTVNPMESTPNTIKAFLS 251
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 YSAAYPLRSVSAEETTDCLIHFISLF---GIPNTIFTDQGTNFTSDLFKSTCSFLKIKNL 435
YS +++ E + H + F G+P+ I D + +TS F + +I ++
Sbjct: 669 YSGVVMATAMNKEGVQQVIQHCLQAFAAWGVPHVIKMDNSSAYTSTRFAAFLKEFRISHI 728
Query: 436 WSTPYHPQSQGALERSHSTLKEYL 507
S PY+PQ Q + +H LK +
Sbjct: 729 TSIPYNPQGQAVVGHTHLYLKNLI 752
>AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ16646 fis, clone TESTI4032090. ).
Length = 266
Score = 38.3 bits (85), Expect = 0.028
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 319 LIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQGALERSHSTLK 498
L+ + GI +I TD +TS + S IK++ PY+ Q Q +ER + +LK
Sbjct: 183 LLQCFVVIGILASIKTDNAPGYTSQALATFFSIRNIKHITGIPYNSQGQAIVERMNLSLK 242
Query: 499 EYL 507
+ L
Sbjct: 243 QQL 245
>U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.
Length = 1053
Score = 36.7 bits (81), Expect = 0.085
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQE 106
+ + Y+W+GI V++YIK C+ CQE
Sbjct: 96 LSKTYWWRGILKQVKDYIKQCSKCQE 121
>BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB domain
containing 11 protein.
Length = 1053
Score = 36.7 bits (81), Expect = 0.085
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 29 IKEKYYWKGIKSDVENYIKNCTLCQE 106
+ + Y+W+GI V++YIK C+ CQE
Sbjct: 96 LSKTYWWRGILKQVKDYIKQCSKCQE 121
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 331 ISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLWS--TPYHPQSQGALERSHSTLK 498
I FG+P I +D G F +DL + L N W Y PQS G +E+ + T+K
Sbjct: 948 IPRFGLPLRIGSDNGPAFVADLVQKRAKVL--GNTWKLHAAYRPQSSGKVEQMNWTIK 1003
>D86964-1|BAA13200.1| 1842|Homo sapiens KIAA0209 protein.
Length = 1842
Score = 31.1 bits (67), Expect = 4.2
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 458 WGWYGVDQRFFIFRKEQVLLKRSEVK--LVPWSVKIVLG-IPKRDMKWIKQSVVSSAD 294
W W + ++ ++ K++ L+ + L+ W +++ G +PK ++K +KQ V S D
Sbjct: 108 WEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKID 165
>BC113457-1|AAI13458.1| 1830|Homo sapiens dedicator of cytokinesis 2
protein.
Length = 1830
Score = 31.1 bits (67), Expect = 4.2
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 458 WGWYGVDQRFFIFRKEQVLLKRSEVK--LVPWSVKIVLG-IPKRDMKWIKQSVVSSAD 294
W W + ++ ++ K++ L+ + L+ W +++ G +PK ++K +KQ V S D
Sbjct: 96 WEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKID 153
>BC104900-1|AAI04901.1| 1830|Homo sapiens dedicator of cytokinesis 2
protein.
Length = 1830
Score = 31.1 bits (67), Expect = 4.2
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 458 WGWYGVDQRFFIFRKEQVLLKRSEVK--LVPWSVKIVLG-IPKRDMKWIKQSVVSSAD 294
W W + ++ ++ K++ L+ + L+ W +++ G +PK ++K +KQ V S D
Sbjct: 96 WEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKID 153
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 44 YWKGIKSDVENYIKNCTLC-QENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPL 205
+W G++ V++Y ++C C N ST+P+ + +++VGP+
Sbjct: 1492 WWPGMQEHVKDYCRSCLFCIPRNLIGSELKVIESPWPLRSTAPWSNLQIEVVGPV 1546
>AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ16127 fis, clone BRACE2037299. ).
Length = 194
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 445 PYHPQSQGALERSHSTLKEYLNHL*TTIK 531
PYHP S G +ER++ LK +L L +K
Sbjct: 26 PYHPSSLGKVERTNGLLKTHLTKLSLQLK 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,071,761
Number of Sequences: 237096
Number of extensions: 2441732
Number of successful extensions: 4511
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4509
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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