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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120241.Seq
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros...    75   7e-14
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen...    75   7e-14
AY095181-1|AAM12274.1|  320|Drosophila melanogaster GM07634p pro...    75   7e-14
S68526-1|AAD14015.2|  624|Drosophila melanogaster pol polyprotei...    72   9e-13
AY089684-1|AAL90422.1|  370|Drosophila melanogaster RH61266p pro...    71   2e-12
AF541949-2|AAN34652.1|  826|Drosophila melanogaster pol protein ...    71   2e-12
AF420242-1|AAL16060.1|  826|Drosophila melanogaster RNA-directed...    71   2e-12
AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.      65   8e-11
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran...    63   3e-10
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran...    52   8e-07
AY089271-1|AAL90009.1|  451|Drosophila melanogaster AT07338p pro...    47   3e-05
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly...    45   9e-05
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro...    45   1e-04
AE014135-102|AAF59331.1|  131|Drosophila melanogaster CG11260-PA...    42   6e-04
X03734-1|CAA27371.1|  930|Drosophila melanogaster protein ( D. m...    42   0.001
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei...    42   0.001
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ...    42   0.001
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ...    42   0.001
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ...    42   0.001
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ...    42   0.001
AJ279888-1|CAB69645.1|  120|Drosophila melanogaster integrase pr...    42   0.001
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr...    42   0.001
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         41   0.002
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ...    40   0.003
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       40   0.003
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc...    38   0.011
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    37   0.024
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed...    36   0.056
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran...    36   0.074
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed...    34   0.23 
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    31   2.1  
X15707-1|CAA33737.1|  267|Drosophila melanogaster protein ( Dros...    30   3.7  
X07656-2|CAA30503.1|  982|Drosophila melanogaster protein ( Dros...    29   6.4  
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.      29   8.5  
AY058502-1|AAL13731.1|  280|Drosophila melanogaster LD21171p pro...    29   8.5  
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ...    29   8.5  

>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
            Drosophila retrotransposon412 genome. ).
          Length = 1237

 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +1

Query: 256  LTKYSAAYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
            LTKY  A P+ + SA+     +   FI  +G   T  TD GT + + +    C +LKIKN
Sbjct: 993  LTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKN 1052

Query: 433  LWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPDMFTQ 558
            + ST +H Q+ G +ERSH TL EY+    +T K T  D++ Q
Sbjct: 1053 ITSTAHHHQTVGVVERSHRTLNEYIRSYISTDK-TDWDVWLQ 1093



 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/81 (35%), Positives = 45/81 (55%)
 Frame = +2

Query: 5    GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
            G  + L+++K  YYWK +   ++ Y++ C  CQ+ K  +   + PM IT T    F RV 
Sbjct: 911  GITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKH-TKTPMTITETPEHAFDRVV 969

Query: 185  LDIVGPLPESGTAKLXYVMTL 247
            +D +GPLP+S      Y +TL
Sbjct: 970  VDTIGPLPKSENGN-EYAVTL 989



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 507  KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYK----QDLTT 674
            +S+++ ++ DW  ++   +  +NT      N+ PYEL+FG  + +P    K    + +  
Sbjct: 1078 RSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYN 1137

Query: 675  YPDYVRMLQHRLKQSW 722
              DY +  ++RL+ ++
Sbjct: 1138 IDDYAKESKYRLEVAY 1153


>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
            polymerase protein.
          Length = 1000

 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +1

Query: 256  LTKYSAAYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
            LTKY  A P+ + SA+     +   FI  +G   T  TD GT + + +    C +LKIKN
Sbjct: 756  LTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKN 815

Query: 433  LWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPDMFTQ 558
            + ST +H Q+ G +ERSH TL EY+    +T K T  D++ Q
Sbjct: 816  ITSTAHHHQTVGVVERSHRTLNEYIRSYISTDK-TDWDVWLQ 856



 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/81 (35%), Positives = 45/81 (55%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  + L+++K  YYWK +   ++ Y++ C  CQ+ K  +   + PM IT T    F RV 
Sbjct: 674 GITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKH-TKTPMTITETPEHAFDRVV 732

Query: 185 LDIVGPLPESGTAKLXYVMTL 247
           +D +GPLP+S      Y +TL
Sbjct: 733 VDTIGPLPKSENGN-EYAVTL 752



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 507  KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYK----QDLTT 674
            +S+++ ++ DW  ++   +  +NT      N+ PYEL+FG  + +P    K    + +  
Sbjct: 841  RSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYN 900

Query: 675  YPDYVRMLQHRLKQSW 722
              DY +  ++RL+ ++
Sbjct: 901  IDDYAKESKYRLEVAY 916


>AY095181-1|AAM12274.1|  320|Drosophila melanogaster GM07634p
           protein.
          Length = 320

 Score = 75.4 bits (177), Expect = 7e-14
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +1

Query: 256 LTKYSAAYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
           LTKY  A P+ + SA+     +   FI  +G   T  TD GT + + +    C +LKIKN
Sbjct: 144 LTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKN 203

Query: 433 LWSTPYHPQSQGALERSHSTLKEYLNHL*TTIKMTGPDMFTQ 558
           + ST +H Q+ G +ERSH TL EY+    +T K T  D++ Q
Sbjct: 204 ITSTAHHHQTVGVVERSHRTLNEYIRSYISTDK-TDWDVWLQ 244



 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/81 (35%), Positives = 45/81 (55%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  + L+++K  YYWK +   ++ Y++ C  CQ+ K  +   + PM IT T    F RV 
Sbjct: 62  GITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKH-TKTPMTITETPEHAFDRVV 120

Query: 185 LDIVGPLPESGTAKLXYVMTL 247
           +D +GPLP+S      Y +TL
Sbjct: 121 VDTIGPLPKSENGN-EYAVTL 140



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 507 KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYK----QDLTT 674
           +S+++ ++ DW  ++   +  +NT      N+ PYEL+FG  + +P    K    + +  
Sbjct: 229 RSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYN 288

Query: 675 YPDYVRMLQHRLKQSW 722
             DY +  ++RL+ ++
Sbjct: 289 IDDYAKESKYRLEVAY 304


>S68526-1|AAD14015.2|  624|Drosophila melanogaster pol polyprotein
           protein.
          Length = 624

 Score = 71.7 bits (168), Expect = 9e-13
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 LTKYSAAYPLRSVSAEETTDCLI-HFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
           LTKY    P+ + SA+     +  +FI  +G   TI TD GT + + +    C ++KIKN
Sbjct: 380 LTKYLVTVPIPNKSAKSVAKAVFENFILKYGPMKTIITDMGTEYKNQIIDDLCKYMKIKN 439

Query: 433 LWSTPYHPQSQGALERSHSTLKEYL 507
           + ST +H Q+ G +ERSH T  EY+
Sbjct: 440 ITSTAHHHQTLGTIERSHRTFNEYV 464



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFG 626
           +S+++ ++ DW  ++      +NT      ++ PYEL+FG
Sbjct: 465 RSYISVDKTDWDIWIQYFTYCFNTTPSVVHDYCPYELVFG 504


>AY089684-1|AAL90422.1|  370|Drosophila melanogaster RH61266p
           protein.
          Length = 370

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 LTKYSAAYPLRSVSAEETTDCLI-HFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
           LTKY    P+ + SA      +  +FI  +G   T  +D GT + +++ +  C ++KI+N
Sbjct: 126 LTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQDMCKYMKIEN 185

Query: 433 LWSTPYHPQSQGALERSHSTLKEYL 507
           L ST YH Q+ G +ERSH T  EY+
Sbjct: 186 LTSTAYHHQTLGTIERSHRTFNEYI 210



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  R L++IK  YYWK +   ++ YI+ C  CQ +K      + P+  T T T+ F  V 
Sbjct: 44  GITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTH-TKTPLTYTETPTNAFDIVI 102

Query: 185 LDIVGPLPESGTAKLXYVMTL 247
           +D VGPLP+S      Y++TL
Sbjct: 103 VDTVGPLPKSEYGN-EYIVTL 122



 Score = 32.7 bits (71), Expect = 0.52
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFG 626
           +S+++ ++ DW  ++      +NT      N+ PYEL+FG
Sbjct: 211 RSYISADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFG 250


>AF541949-2|AAN34652.1|  826|Drosophila melanogaster pol protein
           protein.
          Length = 826

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 LTKYSAAYPLRSVSAEETTDCLI-HFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
           LTKY    P+ + SA      +  +FI  +G   T  +D GT + +++ +  C ++KI+N
Sbjct: 582 LTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQDMCKYMKIEN 641

Query: 433 LWSTPYHPQSQGALERSHSTLKEYL 507
           L ST YH Q+ G +ERSH T  EY+
Sbjct: 642 LTSTAYHHQTLGTIERSHRTFNEYI 666



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  R L++IK  YYWK +   ++ YI+ C  CQ +K      + P+  T T T+ F  V 
Sbjct: 500 GITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTH-TKTPLTYTETPTNAFDIVI 558

Query: 185 LDIVGPLPESGTAKLXYVMTL 247
           +D VGPLP+S      Y++TL
Sbjct: 559 VDTVGPLPKSEYGN-EYIVTL 578



 Score = 32.7 bits (71), Expect = 0.52
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFG 626
           +S+++ ++ DW  ++      +NT      N+ PYEL+FG
Sbjct: 667 RSYISADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFG 706


>AF420242-1|AAL16060.1|  826|Drosophila melanogaster RNA-directed
           DNA polymerase protein.
          Length = 826

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 LTKYSAAYPLRSVSAEETTDCLI-HFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
           LTKY    P+ + SA      +  +FI  +G   T  +D GT + +++ +  C ++KI+N
Sbjct: 582 LTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQDMCKYMKIEN 641

Query: 433 LWSTPYHPQSQGALERSHSTLKEYL 507
           L ST YH Q+ G +ERSH T  EY+
Sbjct: 642 LTSTAYHHQTLGTIERSHRTFNEYI 666



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  R L++IK  YYWK +   ++ YI+ C  CQ +K      + P+  T T T+ F  V 
Sbjct: 500 GITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTH-TKTPLTYTETPTNAFDIVI 558

Query: 185 LDIVGPLPESGTAKLXYVMTL 247
           +D VGPLP+S      Y++TL
Sbjct: 559 VDTVGPLPKSEYGN-EYIVTL 578



 Score = 32.7 bits (71), Expect = 0.52
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFG 626
           +S+++ ++ DW  ++      +NT      N+ PYEL+FG
Sbjct: 667 RSYISADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFG 706


>AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.
          Length = 994

 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256  LTKYSAAYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
            LTK+    P  + SA+     +   F+  +G   T  TDQGT + + L    C ++ I+N
Sbjct: 751  LTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFITDQGTEYKNSLMNELCKYMHIEN 810

Query: 433  LWSTPYHPQSQGALERSHSTLKEYL 507
            L S+ +H Q+ G +ERSH T  EY+
Sbjct: 811  LTSSAHHHQTLGTIERSHRTFNEYI 835



 Score = 55.2 bits (127), Expect = 9e-08
 Identities = 24/70 (34%), Positives = 38/70 (54%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G +R  S+IK  YYW  +   +  Y+K C  CQ+ K +    + P+ +  T  + F  V 
Sbjct: 669 GISRTQSKIKRFYYWPQMTKTISKYVKTCLKCQQAK-ITTHTKTPLTLMPTPATAFDTVL 727

Query: 185 LDIVGPLPES 214
           +D +GPLP+S
Sbjct: 728 IDTIGPLPKS 737



 Score = 33.1 bits (72), Expect = 0.40
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = +3

Query: 507  KSFVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGH--KAFIPDS-IYKQD-LTT 674
            +S+++ N+ DW  ++      +NT      ++ PYEL+FG   + F   S I K D +  
Sbjct: 836  RSYISVNKSDWDIWLPYFTYCFNTTPSIVHDYCPYELVFGRLPRQFKDFSKINKIDPIYN 895

Query: 675  YPDYVRMLQHRLKQSW 722
              DY + L+ RL+ S+
Sbjct: 896  LDDYSKELKCRLELSY 911


>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
            transcriptase protein.
          Length = 1088

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
            + +K++AAYP+ + +       L HFIS FGIP  +  DQG  F SD+F   C+   I +
Sbjct: 837  KFSKFAAAYPITNRNCINVVKALKHFISQFGIPKKLIYDQGAEFASDMFNKFCTQFNI-D 895

Query: 433  LWSTPYHPQSQGA-LERSHSTLKE 501
            L  T +   S  + +ER HSTL E
Sbjct: 896  LHVTSFQQSSSNSPVERLHSTLTE 919



 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 561  MLSYNTAIHSTTNFSPYELLFG 626
            +++YN AIHS T  +P+EL  G
Sbjct: 945  LITYNNAIHSATKHTPFELFNG 966


>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
            transcriptase protein.
          Length = 1217

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 25/83 (30%), Positives = 43/83 (51%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKN 432
            + +K++A YP+ + +       + +F S FG+P  +  DQG  F +D+F+  CS   I  
Sbjct: 948  KFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLPKKLIHDQGVEFCNDIFRKFCSQYNILL 1007

Query: 433  LWSTPYHPQSQGALERSHSTLKE 501
              ++     S   +ER HS+L E
Sbjct: 1008 HVTSFQQSSSNSPVERLHSSLTE 1030



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 561  MLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYKQDLTTYPDYVRMLQHRL 710
            +++YN AIHSTT  +P+EL  G       +I   +   Y + +   Q +L
Sbjct: 1056 VITYNNAIHSTTKHTPFELFNGRTHLFEKTIIPNNEHDYLNKLNTFQDKL 1105



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 29   IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDI 193
            +K + Y+  +K+ +   I+NC  C + K  R+      +   T + P   + +DI
Sbjct: 880  LKRETYFPNMKNKISELIRNCETCLKLKYDRQPQNIVFETPETPSKPLDIIHIDI 934


>AY089271-1|AAL90009.1|  451|Drosophila melanogaster AT07338p
           protein.
          Length = 451

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +2

Query: 38  KYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVSLDIVGPLPES 214
           +YYW G+   V  Y++NC  C   K   +   A   +T     P+  V  D VGPLP S
Sbjct: 119 RYYWPGMHRGVRKYVRNCECCMMYKP-SQLQAAGKMLTQVPEEPWATVCADFVGPLPRS 176



 Score = 39.5 bits (88), Expect = 0.005
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 253 RLTKYSAAYPLRSVSAEETTDCLIH-FISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIK 429
           R +K++   P+R  + E     +    ++ +G+P  + TD     T   F+     L ++
Sbjct: 189 RFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMITDNNVQLTIRAFRKFLEELGVR 248

Query: 430 NLWSTPYHPQSQGALERSHSTLK 498
           +  + PY PQ +   ER++ T+K
Sbjct: 249 HQLTAPYTPQ-ENPTERANRTVK 270



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = +3

Query: 513 FVNDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYKQDLT 671
           F   +Q  W  +     L+ NT++  TT +SP  +  G +  +P++++ +  T
Sbjct: 276 FTGADQRTWDEHWPELQLAVNTSVAETTGYSPAFITQGREPRLPNALFDEKTT 328


>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
            polyprotein protein.
          Length = 1333

 Score = 45.2 bits (102), Expect = 9e-05
 Identities = 23/86 (26%), Positives = 44/86 (51%)
 Frame = +1

Query: 259  TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
            +K+   +P +S   EE    L  + ++FG P  I +D+GT FTS  F+   S   ++++ 
Sbjct: 1067 SKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVC 1126

Query: 439  STPYHPQSQGALERSHSTLKEYLNHL 516
            +T    +  G +ER +  +   ++ L
Sbjct: 1127 TTTGVARGNGQIERVNRLILAIISKL 1152



 Score = 35.1 bits (77), Expect = 0.098
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 519  NDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAF 638
            +D    W +YV     + N  +HS+   SP+E++FG K +
Sbjct: 1154 SDEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMY 1193


>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
           protein.
          Length = 1026

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 22/74 (29%), Positives = 39/74 (52%)
 Frame = +1

Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
           +K+   +P +S   EE    L  + ++FG P  I +D+GT FTS  F+   S   ++++ 
Sbjct: 760 SKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVC 819

Query: 439 STPYHPQSQGALER 480
           +T    +  G +ER
Sbjct: 820 TTTGVARGNGQIER 833



 Score = 35.1 bits (77), Expect = 0.098
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 519 NDNQDDWPRYVYTAMLSYNTAIHSTTNFSPYELLFGHKAF 638
           +D    W +YV     + N  +HS+   SP+E++FG K +
Sbjct: 847 SDEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMY 886


>AE014135-102|AAF59331.1|  131|Drosophila melanogaster CG11260-PA
           protein.
          Length = 131

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +1

Query: 259 TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNL 435
           +KY   YP RS   EE  +C+      FG P  I +D+G  FTS LFK      +I++L
Sbjct: 24  SKYVWFYPTRSTGVEEVLNCIERQALNFGKPFRIVSDRGAAFTSHLFKEYYEKHQIRHL 82


>X03734-1|CAA27371.1|  930|Drosophila melanogaster protein ( D.
            melanogaster retrotransposongypsy gene fragment for
            reverse transcriptase-like enzyme.).
          Length = 930

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 808  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNTFGID 867

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 868  IVNAPPLHSSSNGQVERFHSTLAE 891


>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
            protein.
          Length = 1010

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 803  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 862

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 863  IVNAPPLHSSSNGQVERFHSTLAE 886


>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
            protein.
          Length = 1045

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 838  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 897

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 898  IVNAPPLHSSSNGQVERFHSTLAE 921


>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
            protein.
          Length = 1045

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 838  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 897

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 898  IVNAPPLHSSSNGQVERFHSTLAE 921


>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
            protein.
          Length = 1010

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 803  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 862

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 863  IVNAPPLHSSSNGQVERFHSTLAE 886


>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
            protein.
          Length = 1010

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 803  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 862

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 863  IVNAPPLHSSSNGQVERFHSTLAE 886


>AJ279888-1|CAB69645.1|  120|Drosophila melanogaster integrase
           protein.
          Length = 120

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253 RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
           + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 35  KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 94

Query: 430 NLWSTPYHPQSQGALERSHSTLKE 501
            + + P H  S G +ER HSTL E
Sbjct: 95  IVNAPPLHSSSNGQVERFHSTLAE 118


>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
            protein.
          Length = 1463

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +KY+   P+ S +  + T  L+  I+LF    T++ D    F S+   S   +   I 
Sbjct: 1256 KFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGID 1315

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
             + + P H  S G +ER HSTL E
Sbjct: 1316 IVNAPPLHSSSNGQVERFHSTLAE 1339


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 22/86 (25%), Positives = 40/86 (46%)
 Frame = +1

Query: 259  TKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSFLKIKNLW 438
            TK+   Y  ++ + +E    L  +   +  P  I +D+G  FTS  F S      +K++ 
Sbjct: 1296 TKFVRLYATKTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFDSFLKECNVKHIK 1355

Query: 439  STPYHPQSQGALERSHSTLKEYLNHL 516
                 PQ+ G +ER + +L   ++ L
Sbjct: 1356 IATGSPQANGQVERINRSLGPMISKL 1381


>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
           protein.
          Length = 1037

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G N +   I+EKYY+  ++  ++NYI NC +C   K  R+  +    IT T       + 
Sbjct: 745 GINEIFISIREKYYYPKMQKFIQNYINNCKICNLAKYDRQPIKYNFNITETPDKINDIIH 804

Query: 185 LDIVGP 202
           +DI  P
Sbjct: 805 IDIWYP 810



 Score = 33.9 bits (74), Expect = 0.23
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 522  DNQDDWPRYVYTAMLSYNTAIHSTTNFSPYEL 617
            +N D     VY A++ YN  IHSTTN  P +L
Sbjct: 912  NNFDTIQENVYKAIVCYNNTIHSTTNIRPIDL 943


>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +2

Query: 5    GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLC---QENKALRRCNRAPMQITTTSTSPFQ 175
            G N M + I+ KY+  G+K+ ++ Y++ C  C   ++N A +     P +   T T PF 
Sbjct: 1399 GINLMRNYIQRKYWIFGLKNSLKKYLRECVTCARYKQNTAQQIMGNLP-KYRVTMTFPFL 1457

Query: 176  RVSLDIVGP 202
               +D  GP
Sbjct: 1458 NTGIDYAGP 1466


>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
            transcriptase polyprotein protein.
          Length = 1041

 Score = 38.3 bits (85), Expect = 0.011
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +K++   P+ S +  +    ++  ++ F    TIF D   +  S+  KS   +   + 
Sbjct: 834  KFSKFAIVQPIGSRTITDLEPAIMQLMNFFPHSKTIFCDNEPSINSESIKSLLKNRFNVD 893

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
               + P H  S G +ER HSTL E
Sbjct: 894  IANAPPLHSTSNGQVERFHSTLLE 917


>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
            protein.
          Length = 1053

 Score = 37.1 bits (82), Expect = 0.024
 Identities = 20/85 (23%), Positives = 39/85 (45%)
 Frame = +2

Query: 2    LGGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRV 181
            LG  + L ++ + Y++  +   V  ++ NC  C+  K+     +A +     ++ P+  +
Sbjct: 961  LGWQKTLDKVYQYYWFAKMNKYVRKFVSNCITCRSVKSSSGKVQAELHSIPKTSIPWHTI 1020

Query: 182  SLDIVGPLPESGTAKLXYVMTLQDA 256
             +DI G L      K  YV+   DA
Sbjct: 1021 HIDITGKLSGKSDLK-EYVIVQIDA 1044


>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
           DNA polymerase protein.
          Length = 1065

 Score = 35.9 bits (79), Expect = 0.056
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQRVS 184
           G  +  +  KEKYY+   +  ++N I  C +C  +K   R  +   ++T  + +P ++  
Sbjct: 765 GIEKQTNLFKEKYYYPDYQKLIQNIINECEVCNISKTEHRDTKLRYELTPETFNPREKYV 824

Query: 185 LD 190
           +D
Sbjct: 825 ID 826


>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
            transcriptase-like polymeraseprotein.
          Length = 1059

 Score = 35.5 bits (78), Expect = 0.074
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTCSF-LKIK 429
            + +K +    ++S + E+    L   +  +G+P  I  D   +  S   K   +  L I+
Sbjct: 841  KFSKLAMGRVIKSKAVEDIRKALRDIVFYYGVPKLIVMDNEKSLNSASIKFMLTDQLGIE 900

Query: 430  NLWSTPYHPQSQGALERSHSTLKEYLNHL 516
               + PY     G +ER HSTL E +  L
Sbjct: 901  LYKAPPYKSTVNGQIERFHSTLSEIMRCL 929



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 558  AMLSYNTAIHSTTNFSPYELLFGHKAFIPDSIYKQDLTTYPDYVRMLQ 701
            A+  YN  +HS T   P E+ FG  A +    Y+Q      D +R  Q
Sbjct: 945  AIYEYNYTVHSVTKKRPLEVFFGRIATVAPEKYEQARLDNIDRLRQKQ 992


>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
            polymerase protein.
          Length = 1013

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253  RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
            + +K++   P+ S + E+    L+  +++F    TI+ D   +  S    +   +   + 
Sbjct: 806  KFSKFAMVQPILSRTIEDLKAPLLQLMNVFPKAKTIYCDNEPSLKSQTIVAMLENHFGVS 865

Query: 430  NLWSTPYHPQSQGALERSHSTLKE 501
               + P H  S G +ER HSTL E
Sbjct: 866  ISNAPPLHSVSNGQVERFHSTLIE 889


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 5   GGNRMLSRIKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQIT 151
           G  + +    E YY+   +  ++N I  C +C   K   R    PM+IT
Sbjct: 728 GIQKTVKLFSENYYFPNSQLLIQNIINECQVCNLAKTEHRNTEMPMKIT 776


>X15707-1|CAA33737.1|  267|Drosophila melanogaster protein (
           Drosophila melanogasterDNA sequence (isolate CBS) for
           18S rRNA  (3'end), 5.8SrRNA and 28S rRNA (5'end).  ).
          Length = 267

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253 RLTKYSAAYPLRSVSAEETTDCLIHFISLFGIPNTIFTDQGTNFTSDLFKSTC-SFLKIK 429
           + +K++    + S + E+    ++  ++ F     ++ D   +  S    +   +   + 
Sbjct: 84  KFSKFAIEQHVHSRTIEDLKPAILQIMNFFPRARVVYCDNEPSLNSHTISTMLDNHFGVS 143

Query: 430 NLWSTPYHPQSQGALERSHSTLKE 501
              + P H  S G +ER HSTL E
Sbjct: 144 IANAPPLHSVSNGQVERFHSTLLE 167


>X07656-2|CAA30503.1|  982|Drosophila melanogaster protein (
           Drosophila melanogasterretrotransposon 1731 sequence. ).
          Length = 982

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 358 IFTDQGTNFTSDLFKSTCSFLKIKNLWSTPYHPQSQGALERSHSTLKE 501
           I +D G  F +++F        I    + P+ PQ  G  ER++ TL E
Sbjct: 265 IRSDNGGEFVNNVFDDYLKAHGIARQLTIPHTPQQNGVAERANRTLVE 312


>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
          Length = 1003

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 549 VYTAMLSYNTAIHSTTNFSPYELLF 623
           V+ A+  YNT++HS TN  P ++ F
Sbjct: 883 VHIAVDRYNTSVHSVTNRKPADVFF 907


>AY058502-1|AAL13731.1|  280|Drosophila melanogaster LD21171p
           protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 549 VYTAMLSYNTAIHSTTNFSPYELLF 623
           V+ A+  YNT++HS TN  P ++ F
Sbjct: 160 VHIAVDRYNTSVHSVTNRKPADVFF 184


>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
            protein.
          Length = 1571

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 5    GGNRMLSR-IKEKYYWKGIKSDVENYIKNCTLCQENKALRRCNRAPMQITTTSTSPFQR 178
            GGN+++ R I+ KY+   IK+ ++  + +C +C  +K  RR     M +     + F R
Sbjct: 1358 GGNQLMVRLIRSKYWIPRIKNLMKAVVNSCKVCVIHK--RRLQSQLMGVLPKERASFSR 1414


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,584,389
Number of Sequences: 53049
Number of extensions: 707110
Number of successful extensions: 1932
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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