Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120240.Seq
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   7.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 260  EHVLDLVGMLKRRFVL 213
            +H ++LV M+K RFV+
Sbjct: 1256 QHCVELVSMIKARFVV 1271


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 654 AMSAMRLASCAVCGARFRNLAEPFQRRVEPQSF 556
           A    ++  C  CG  FR+LAE      + Q +
Sbjct: 472 AEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHY 504


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +1

Query: 109 TCSVMSSQSDLWPR-TSP 159
           TCS++   + LWP+ T P
Sbjct: 81  TCSMLCGSTQLWPQPTGP 98


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 606 NARRKRRSWPTAWRTLRK 659
           N+ ++   WP  +RT++K
Sbjct: 150 NSMKREYYWPNMYRTIKK 167


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 307 HSAHYQIWRDSTDNE 351
           H   Y IW D +DN+
Sbjct: 30  HQQIYGIWADDSDND 44


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 526 LPPNLRGHRQFLRQIVNFGNNIIC---IHFNGRRVLARA*HLRNDLLQK 389
           L P  R  ++ L+ + +F NN+I     HF+     +R      DLL K
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLK 275


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 526 LPPNLRGHRQFLRQIVNFGNNIIC---IHFNGRRVLARA*HLRNDLLQK 389
           L P  R  ++ L+ + +F NN+I     HF+     +R      DLL K
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLK 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,491
Number of Sequences: 336
Number of extensions: 4514
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)