Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120240.Seq
(882 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL009193-3|CAA15694.2| 991|Drosophila melanogaster EG:103B4.4 p... 31 2.8
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 29 6.4
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB... 29 6.4
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 29 8.5
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 29 8.5
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 29 8.5
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 29 8.5
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 29 8.5
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 29 8.5
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 29 8.5
>AL009193-3|CAA15694.2| 991|Drosophila melanogaster EG:103B4.4
protein.
Length = 991
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 667 YHVLRNVRHAVGQLRRLRRAFSQSCRAVSA-SRRATIISLANKMSDRLLPPNLRGHRQFL 491
++ R++ H V RLR+ F + R + +++ K+ PN + +
Sbjct: 354 HYAPRDLAHQVAPRSRLRKRFETAYRGIKTFGFSQKVLNFCVKLPKN--SPNFGQNNEHN 411
Query: 490 RQIVNFGNNIICIHFNG 440
Q+++FG N+I NG
Sbjct: 412 AQVLSFGENVILDFVNG 428
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 303 GCKYSGSPCFATLSGACAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRC 151
G YS S C A ++ G +A S T R R +LP+ +L + C
Sbjct: 801 GKSYSSSECLADVTMPSYGGNSYASRSKSTSRSRKSMLPIRDLSEMRTDEC 851
>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
isoform B protein.
Length = 1249
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 503 VATQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPQTAQLANR 640
++T +WR+ H++C N CG + NG R + P+ + R
Sbjct: 740 ISTPLWRRDNTGHYLC--NACGLYMKMNGMNRPLIKQPRRLSASKR 783
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 72 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 127
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 72 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 127
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 85 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 140
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 72 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 127
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 72 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 127
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 72 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 127
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 676 GFGYHVLRNVRHAVGQLRRLRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNLR 509
GF ++ NVR L + R + VS+ +R I+ A ++S RL PN R
Sbjct: 85 GFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGR 140
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,442,197
Number of Sequences: 53049
Number of extensions: 914686
Number of successful extensions: 2989
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2989
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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