Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120232.Seq
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0544 + 4306436-4306762                                           30   2.0  
01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678     29   3.5  
08_02_1054 + 23980962-23981096,23981208-23981420,23983062-239831...    28   6.2  
04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471           28   6.2  
11_02_0036 + 7599646-7599950,7600106-7600145,7600403-7600437,760...    28   8.1  
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206     28   8.1  

>11_01_0544 + 4306436-4306762
          Length = 108

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 616 LSRISQLSFNSAKFALVSTAVCLFLLAGIAALSLEDTMSIGRPFFYPSF 470
           L+  S+ S   A  A V   +CLFL+A  AA +  +T     P + PS+
Sbjct: 5   LATRSRKSLAIAVAAAVPLLMCLFLVAAAAAAASSETAVASSPQYQPSY 53


>01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678
          Length = 261

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 316 KKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFV 450
           +   I+ N Y+   +W T+  QP    S   W L K +   A +V
Sbjct: 133 RSSTISENSYLCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYV 177


>08_02_1054 +
           23980962-23981096,23981208-23981420,23983062-23983157,
           23983420-23983565,23983679-23983898,23984502-23984561
          Length = 289

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +1

Query: 373 IKQPEWPSSPAMWDLVKNTPEL------ADFVFIFDHTEKMGKKMADRSTSCLQATTQQF 534
           ++ P+WP+   + DL++ T  L      A  V  F H E + + + +   + LQ    +F
Sbjct: 40  LRLPDWPAPDRVRDLIRRTRSLTERPFGAAIVLAFPHEENL-RVVLEEKLAVLQVYWGEF 98

Query: 535 QRAKKD 552
            R + D
Sbjct: 99  PRERVD 104


>04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471
          Length = 331

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 364 YTKIKQPEWPSSPAMWDLVKNTPELADFVFI-FDHTEK 474
           + +  +PEWPSS A+     N PEL   V +  D T K
Sbjct: 169 HDQTNKPEWPSSVAVQHDQTNKPELPSSVAVQHDQTNK 206


>11_02_0036 +
           7599646-7599950,7600106-7600145,7600403-7600437,
           7600789-7601189,7601281-7601361,7601451-7601536
          Length = 315

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 480 THLFSVIKNEHKICQFGRVFHQIP 409
           TH F  +K E+ IC F R    IP
Sbjct: 198 THSFDAMKKEYYICGFARSIESIP 221


>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
          Length = 961

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 4   RCVFITNELPGCWALKKYIIKNTSGSFQRFTKIKHGKHAGATI 132
           +  FIT     C+    + +KN   +FQR T+I  G   G  +
Sbjct: 803 KTAFITRIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQIGRNV 845


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,194,253
Number of Sequences: 37544
Number of extensions: 411248
Number of successful extensions: 1071
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)