Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120230X.Seq
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    27   0.38 
AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    25   1.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.1  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+R  VQI   A + +PDH PD
Sbjct: 396 TKHVIPKRTLVQIPAYAIQRDPDHYPD 422


>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 TGNTCPRRRQVQIDV*ACRPNPDHAPD 268
           T +  P+   VQI + A + +PDH PD
Sbjct: 19  TRHIVPKDTVVQIPIYAIQRDPDHYPD 45


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 465 SLVSISTAGAYLPVHST*GMTSSKSHSCNSMA*GNL 358
           SL  + TA A +PV S   ++++ S SC+S A G+L
Sbjct: 223 SLSPVHTAPA-IPVSSCSPLSTASSASCSSSAAGSL 257


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 183 CERAIRVHVDGKYKSTFEHADQIQT 257
           CER +     G YK   EH   + T
Sbjct: 180 CERTLNASGGGSYKLKNEHGQTVST 204


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 201 HVLPVHNLHILNCWR 157
           HVL V N   LNC+R
Sbjct: 33  HVLLVRNQRALNCYR 47


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 201 HVLPVHNLHILNCWR 157
           HVL V N   LNC+R
Sbjct: 33  HVLLVRNQRALNCYR 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,307
Number of Sequences: 2352
Number of extensions: 13055
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)